Gene : Sobic.004G180700 S. bicolor v3.1.1
Defline:  (1 of 1) PF01266//PF01494 - FAD dependent oxidoreductase (DAO) // FAD binding domain (FAD_binding_3) Genomic Order:  1883
Name:  ? Sobic.004G180700 Secondary Identifier:  ? PAC:37934047
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G180700 0.5kb upstream 0.5kb upstream 3747 true Chr04: 53317199-53320945 Sorghum bicolor
Sobic.004G180700 0.5kb upstream 0.5kb upstream 500 false Chr04: 53317199-53317698 Sorghum bicolor
Sobic.004G180700 0.5kb downstream 0.5kb downstream 3747 true Chr04: 53317699-53321445 Sorghum bicolor
Sobic.004G180700 0.5kb downstream 0.5kb downstream 500 false Chr04: 53320946-53321445 Sorghum bicolor
Sobic.004G180700 1.0kb upstream 1.0kb upstream 4247 true Chr04: 53316699-53320945 Sorghum bicolor
Sobic.004G180700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 53316699-53317698 Sorghum bicolor
Sobic.004G180700 1.0kb downstream 1.0kb downstream 4247 true Chr04: 53317699-53321945 Sorghum bicolor
Sobic.004G180700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 53320946-53321945 Sorghum bicolor
Sobic.004G180700 2.0kb upstream 2.0kb upstream 5247 true Chr04: 53315699-53320945 Sorghum bicolor
Sobic.004G180700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 53315699-53317698 Sorghum bicolor
Sobic.004G180700 2.0kb downstream 2.0kb downstream 5247 true Chr04: 53317699-53322945 Sorghum bicolor
Sobic.004G180700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 53320946-53322945 Sorghum bicolor
Sobic.004G180700 5.0kb upstream 5.0kb upstream 8247 true Chr04: 53312699-53320945 Sorghum bicolor
Sobic.004G180700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 53312699-53317698 Sorghum bicolor
Sobic.004G180700 5.0kb downstream 5.0kb downstream 8247 true Chr04: 53317699-53325945 Sorghum bicolor
Sobic.004G180700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 53320946-53325945 Sorghum bicolor
Sobic.004G180700 10.0kb upstream 10.0kb upstream 13247 true Chr04: 53307699-53320945 Sorghum bicolor
Sobic.004G180700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 53307699-53317698 Sorghum bicolor
Sobic.004G180700 10.0kb downstream 10.0kb downstream 13247 true Chr04: 53317699-53330945 Sorghum bicolor
Sobic.004G180700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 53320946-53330945 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122173817 5267 Panicoideae View MSA
124587498 5269 Grass View MSA
122050321 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121311854 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.283        
cufflinks 0.003     Low  
cufflinks 0.012     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.038     Low  
cufflinks 0.002     Low Low
cufflinks 0.004     Low  
cufflinks 0.037     Low  
cufflinks 6.926       High
cufflinks 6.791       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.345       High
cufflinks 0.003     Low  
cufflinks 0.015     Low  
cufflinks 0.027     Low  
cufflinks 0.03     Low  
cufflinks 0.013     Low  
cufflinks 0.014     Low  
cufflinks 0.005     Low  
cufflinks 8.304       High
cufflinks 12.193     High High
cufflinks 11.331     High High
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.415        
cufflinks 0.016     Low  
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low

0 Strain