Gene : Sobic.009G068400 S. bicolor v3.1.1
Defline:  (1 of 2) K09272 - structure-specific recognition protein 1 (SSRP1) Genomic Order:  703
Name:  ? Sobic.009G068400 Secondary Identifier:  ? PAC:37919364
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G068400 0.5kb upstream 0.5kb upstream 6033 true Chr09: 7494854-7500886 Sorghum bicolor
Sobic.009G068400 0.5kb upstream 0.5kb upstream 500 false Chr09: 7494854-7495353 Sorghum bicolor
Sobic.009G068400 0.5kb downstream 0.5kb downstream 6033 true Chr09: 7495354-7501386 Sorghum bicolor
Sobic.009G068400 0.5kb downstream 0.5kb downstream 500 false Chr09: 7500887-7501386 Sorghum bicolor
Sobic.009G068400 1.0kb upstream 1.0kb upstream 6533 true Chr09: 7494354-7500886 Sorghum bicolor
Sobic.009G068400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7494354-7495353 Sorghum bicolor
Sobic.009G068400 1.0kb downstream 1.0kb downstream 6533 true Chr09: 7495354-7501886 Sorghum bicolor
Sobic.009G068400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7500887-7501886 Sorghum bicolor
Sobic.009G068400 2.0kb upstream 2.0kb upstream 7533 true Chr09: 7493354-7500886 Sorghum bicolor
Sobic.009G068400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7493354-7495353 Sorghum bicolor
Sobic.009G068400 2.0kb downstream 2.0kb downstream 7533 true Chr09: 7495354-7502886 Sorghum bicolor
Sobic.009G068400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7500887-7502886 Sorghum bicolor
Sobic.009G068400 5.0kb upstream 5.0kb upstream 10533 true Chr09: 7490354-7500886 Sorghum bicolor
Sobic.009G068400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7490354-7495353 Sorghum bicolor
Sobic.009G068400 5.0kb downstream 5.0kb downstream 10533 true Chr09: 7495354-7505886 Sorghum bicolor
Sobic.009G068400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7500887-7505886 Sorghum bicolor
Sobic.009G068400 10.0kb upstream 10.0kb upstream 15533 true Chr09: 7485354-7500886 Sorghum bicolor
Sobic.009G068400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7485354-7495353 Sorghum bicolor
Sobic.009G068400 10.0kb downstream 10.0kb downstream 15533 true Chr09: 7495354-7510886 Sorghum bicolor
Sobic.009G068400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7500887-7510886 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183191 5267 Panicoideae View MSA
124586936 5269 Grass View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.126       High
cufflinks 0.005     Low  
cufflinks 0.22       High
cufflinks 0.178       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.015     Low  
cufflinks 0.012     Low  
cufflinks 0.011     Low  
cufflinks 0.03     Low  
cufflinks 0.005     Low  
cufflinks 0.02     Low  
cufflinks 0.008     Low  
cufflinks 0.039     Low  
cufflinks 1.136       High
cufflinks 0.12       High
cufflinks 0.016     Low  
cufflinks 0.012     Low  
cufflinks 0.004     Low Low
cufflinks 0.022     Low  
cufflinks 0.005     Low  
cufflinks 0.01     Low  
cufflinks 0.012     Low  
cufflinks 0.015     Low  
cufflinks 0.023     Low  
cufflinks 0.005     Low  
cufflinks 0.017     Low  
cufflinks 0.183       High
cufflinks 0.001     Low Low
cufflinks 0.349       High

0 Strain