Gene : Sobic.009G071800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13697//PTHR13697:SF23 - PHOSPHOFRUCTOKINASE // SUBFAMILY NOT NAMED Genomic Order:  742
Name:  ? Sobic.009G071800 Secondary Identifier:  ? PAC:37921467
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor ANAEROFRUCAT-PWY Sorghum bicolor pathologic  
Sbicolor ANAGLYCOLYSIS-PWY Sorghum bicolor pathologic  
Sbicolor PWY-1042 Sorghum bicolor pathologic  
Sbicolor PWY-5464 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G071800 0.5kb upstream 0.5kb upstream 3282 true Chr09: 8621487-8624768 Sorghum bicolor
Sobic.009G071800 0.5kb upstream 0.5kb upstream 500 false Chr09: 8621487-8621986 Sorghum bicolor
Sobic.009G071800 0.5kb downstream 0.5kb downstream 3282 true Chr09: 8621987-8625268 Sorghum bicolor
Sobic.009G071800 0.5kb downstream 0.5kb downstream 500 false Chr09: 8624769-8625268 Sorghum bicolor
Sobic.009G071800 1.0kb upstream 1.0kb upstream 3782 true Chr09: 8620987-8624768 Sorghum bicolor
Sobic.009G071800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8620987-8621986 Sorghum bicolor
Sobic.009G071800 1.0kb downstream 1.0kb downstream 3782 true Chr09: 8621987-8625768 Sorghum bicolor
Sobic.009G071800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8624769-8625768 Sorghum bicolor
Sobic.009G071800 2.0kb upstream 2.0kb upstream 4782 true Chr09: 8619987-8624768 Sorghum bicolor
Sobic.009G071800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8619987-8621986 Sorghum bicolor
Sobic.009G071800 2.0kb downstream 2.0kb downstream 4782 true Chr09: 8621987-8626768 Sorghum bicolor
Sobic.009G071800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8624769-8626768 Sorghum bicolor
Sobic.009G071800 5.0kb upstream 5.0kb upstream 7782 true Chr09: 8616987-8624768 Sorghum bicolor
Sobic.009G071800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8616987-8621986 Sorghum bicolor
Sobic.009G071800 5.0kb downstream 5.0kb downstream 7782 true Chr09: 8621987-8629768 Sorghum bicolor
Sobic.009G071800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8624769-8629768 Sorghum bicolor
Sobic.009G071800 10.0kb upstream 10.0kb upstream 12782 true Chr09: 8611987-8624768 Sorghum bicolor
Sobic.009G071800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8611987-8621986 Sorghum bicolor
Sobic.009G071800 10.0kb downstream 10.0kb downstream 12782 true Chr09: 8621987-8634768 Sorghum bicolor
Sobic.009G071800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8624769-8634768 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121992979 5273 Angiosperm View MSA
122179122 5267 Panicoideae View MSA
124573896 5269 Grass View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.677     High High
cufflinks 0.396        
cufflinks 15.338     High High
cufflinks 10.961        
cufflinks 2.319        
cufflinks 17.212     High High
cufflinks 0.456        
cufflinks 0.323       Low
cufflinks 12.253        
cufflinks 7.51        
cufflinks 8.3        
cufflinks 2.129        
cufflinks 2.594        
cufflinks 1.823        
cufflinks 1.166        
cufflinks 2.378        
cufflinks 0.363       Low
cufflinks 0.163       Low
cufflinks 5.013        
cufflinks 0.491        
cufflinks 0.019     Low Low
cufflinks 6.817        
cufflinks 1.456        
cufflinks 0.742        
cufflinks 0.712        
cufflinks 0.245       Low
cufflinks 32.53     High High
cufflinks 2.323        
cufflinks 0.171       Low
cufflinks 1.019        

0 Strain