Gene : Sobic.004G165700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10072//PTHR10072:SF43 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1727
Name:  ? Sobic.004G165700 Secondary Identifier:  ? PAC:37931298
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G165700 0.5kb upstream 0.5kb upstream 7003 true Chr04: 51534979-51541981 Sorghum bicolor
Sobic.004G165700 0.5kb upstream 0.5kb upstream 500 false Chr04: 51541482-51541981 Sorghum bicolor
Sobic.004G165700 0.5kb downstream 0.5kb downstream 7003 true Chr04: 51534479-51541481 Sorghum bicolor
Sobic.004G165700 0.5kb downstream 0.5kb downstream 500 false Chr04: 51534479-51534978 Sorghum bicolor
Sobic.004G165700 1.0kb upstream 1.0kb upstream 7503 true Chr04: 51534979-51542481 Sorghum bicolor
Sobic.004G165700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51541482-51542481 Sorghum bicolor
Sobic.004G165700 1.0kb downstream 1.0kb downstream 7503 true Chr04: 51533979-51541481 Sorghum bicolor
Sobic.004G165700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51533979-51534978 Sorghum bicolor
Sobic.004G165700 2.0kb upstream 2.0kb upstream 8503 true Chr04: 51534979-51543481 Sorghum bicolor
Sobic.004G165700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51541482-51543481 Sorghum bicolor
Sobic.004G165700 2.0kb downstream 2.0kb downstream 8503 true Chr04: 51532979-51541481 Sorghum bicolor
Sobic.004G165700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51532979-51534978 Sorghum bicolor
Sobic.004G165700 5.0kb upstream 5.0kb upstream 11503 true Chr04: 51534979-51546481 Sorghum bicolor
Sobic.004G165700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51541482-51546481 Sorghum bicolor
Sobic.004G165700 5.0kb downstream 5.0kb downstream 11503 true Chr04: 51529979-51541481 Sorghum bicolor
Sobic.004G165700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51529979-51534978 Sorghum bicolor
Sobic.004G165700 10.0kb upstream 10.0kb upstream 16503 true Chr04: 51534979-51551481 Sorghum bicolor
Sobic.004G165700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51541482-51551481 Sorghum bicolor
Sobic.004G165700 10.0kb downstream 10.0kb downstream 16503 true Chr04: 51524979-51541481 Sorghum bicolor
Sobic.004G165700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51524979-51534978 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193521 5267 Panicoideae View MSA
124568357 5269 Grass View MSA
122045201 5273 Angiosperm View MSA
121346515 5274 Embryophyte View MSA
123424374 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.57        
cufflinks 9.91     High High
cufflinks 5.889        
cufflinks 4.653        
cufflinks 2.53        
cufflinks 7.284       High
cufflinks 5.654        
cufflinks 6.353       High
cufflinks 3.151        
cufflinks 3.829        
cufflinks 1.292       Low
cufflinks 1.514        
cufflinks 3.166        
cufflinks 1.305       Low
cufflinks 3.694        
cufflinks 8.425       High
cufflinks 5.421        
cufflinks 6.272       High
cufflinks 4.372        
cufflinks 4.847        
cufflinks 2.665        
cufflinks 1.369       Low
cufflinks 1.178       Low
cufflinks 1.17       Low
cufflinks 7.424       High
cufflinks 9.249     High High
cufflinks 1.479        
cufflinks 2.162        
cufflinks 7.648       High
cufflinks 3.202        

0 Strain