Gene : Sobic.004G163000 S. bicolor v3.1.1
Defline:  (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) Genomic Order:  1699
Name:  ? Sobic.004G163000 Secondary Identifier:  ? PAC:37931505
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G163000 0.5kb upstream 0.5kb upstream 10223 true Chr04: 51224284-51234506 Sorghum bicolor
Sobic.004G163000 0.5kb upstream 0.5kb upstream 500 false Chr04: 51224284-51224783 Sorghum bicolor
Sobic.004G163000 0.5kb downstream 0.5kb downstream 10223 true Chr04: 51224784-51235006 Sorghum bicolor
Sobic.004G163000 0.5kb downstream 0.5kb downstream 500 false Chr04: 51234507-51235006 Sorghum bicolor
Sobic.004G163000 1.0kb upstream 1.0kb upstream 10723 true Chr04: 51223784-51234506 Sorghum bicolor
Sobic.004G163000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51223784-51224783 Sorghum bicolor
Sobic.004G163000 1.0kb downstream 1.0kb downstream 10723 true Chr04: 51224784-51235506 Sorghum bicolor
Sobic.004G163000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51234507-51235506 Sorghum bicolor
Sobic.004G163000 2.0kb upstream 2.0kb upstream 11723 true Chr04: 51222784-51234506 Sorghum bicolor
Sobic.004G163000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51222784-51224783 Sorghum bicolor
Sobic.004G163000 2.0kb downstream 2.0kb downstream 11723 true Chr04: 51224784-51236506 Sorghum bicolor
Sobic.004G163000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51234507-51236506 Sorghum bicolor
Sobic.004G163000 5.0kb upstream 5.0kb upstream 14723 true Chr04: 51219784-51234506 Sorghum bicolor
Sobic.004G163000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51219784-51224783 Sorghum bicolor
Sobic.004G163000 5.0kb downstream 5.0kb downstream 14723 true Chr04: 51224784-51239506 Sorghum bicolor
Sobic.004G163000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51234507-51239506 Sorghum bicolor
Sobic.004G163000 10.0kb upstream 10.0kb upstream 19723 true Chr04: 51214784-51234506 Sorghum bicolor
Sobic.004G163000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51214784-51224783 Sorghum bicolor
Sobic.004G163000 10.0kb downstream 10.0kb downstream 19723 true Chr04: 51224784-51244506 Sorghum bicolor
Sobic.004G163000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51234507-51244506 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187055 5267 Panicoideae View MSA
124574801 5269 Grass View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.869        
cufflinks 0.654       Low
cufflinks 1.685        
cufflinks 1.811        
cufflinks 2.342        
cufflinks 2.693        
cufflinks 2.151        
cufflinks 0.99       Low
cufflinks 2.413        
cufflinks 2.561        
cufflinks 2.728        
cufflinks 3.106       High
cufflinks 1.989        
cufflinks 2.098        
cufflinks 2.393        
cufflinks 1.306       Low
cufflinks 2.007        
cufflinks 2.218        
cufflinks 1.123       Low
cufflinks 2.503        
cufflinks 4.332       High
cufflinks 1.993        
cufflinks 2.383        
cufflinks 2.39        
cufflinks 1.421        
cufflinks 0.735       Low
cufflinks 2.529        
cufflinks 5.717       High
cufflinks 1.336        
cufflinks 2.975        

0 Strain