Gene : Sobic.004G158200 S. bicolor v3.1.1
Defline:  (1 of 1) KOG2164 - Predicted E3 ubiquitin ligase Genomic Order:  1649
Name:  ? Sobic.004G158200 Secondary Identifier:  ? PAC:37932171
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G158200 0.5kb upstream 0.5kb upstream 8124 true Chr04: 50297677-50305800 Sorghum bicolor
Sobic.004G158200 0.5kb upstream 0.5kb upstream 500 false Chr04: 50305301-50305800 Sorghum bicolor
Sobic.004G158200 0.5kb downstream 0.5kb downstream 8124 true Chr04: 50297177-50305300 Sorghum bicolor
Sobic.004G158200 0.5kb downstream 0.5kb downstream 500 false Chr04: 50297177-50297676 Sorghum bicolor
Sobic.004G158200 1.0kb upstream 1.0kb upstream 8624 true Chr04: 50297677-50306300 Sorghum bicolor
Sobic.004G158200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50305301-50306300 Sorghum bicolor
Sobic.004G158200 1.0kb downstream 1.0kb downstream 8624 true Chr04: 50296677-50305300 Sorghum bicolor
Sobic.004G158200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50296677-50297676 Sorghum bicolor
Sobic.004G158200 2.0kb upstream 2.0kb upstream 9624 true Chr04: 50297677-50307300 Sorghum bicolor
Sobic.004G158200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50305301-50307300 Sorghum bicolor
Sobic.004G158200 2.0kb downstream 2.0kb downstream 9624 true Chr04: 50295677-50305300 Sorghum bicolor
Sobic.004G158200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50295677-50297676 Sorghum bicolor
Sobic.004G158200 5.0kb upstream 5.0kb upstream 12624 true Chr04: 50297677-50310300 Sorghum bicolor
Sobic.004G158200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50305301-50310300 Sorghum bicolor
Sobic.004G158200 5.0kb downstream 5.0kb downstream 12624 true Chr04: 50292677-50305300 Sorghum bicolor
Sobic.004G158200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50292677-50297676 Sorghum bicolor
Sobic.004G158200 10.0kb upstream 10.0kb upstream 17624 true Chr04: 50297677-50315300 Sorghum bicolor
Sobic.004G158200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50305301-50315300 Sorghum bicolor
Sobic.004G158200 10.0kb downstream 10.0kb downstream 17624 true Chr04: 50287677-50305300 Sorghum bicolor
Sobic.004G158200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50287677-50297676 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175493 5267 Panicoideae View MSA
124577375 5269 Grass View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.044     High  
cufflinks 12.647     High  
cufflinks 10.644     High Low
cufflinks 8.826       Low
cufflinks 15.32     High  
cufflinks 13.285        
cufflinks 12.895     High  
cufflinks 12.346     High  
cufflinks 17.98     High High
cufflinks 20.586     High High
cufflinks 13.011     High  
cufflinks 15.464     High  
cufflinks 20.504     High High
cufflinks 12.242     High  
cufflinks 15.645     High  
cufflinks 9.436       Low
cufflinks 11.343        
cufflinks 13.521     High  
cufflinks 12.477     High  
cufflinks 10.291       Low
cufflinks 19.867     High High
cufflinks 12.462     High  
cufflinks 14.829     High  
cufflinks 13.606     High  
cufflinks 14.631     High  
cufflinks 12.367     High  
cufflinks 13.462     High  
cufflinks 16.135     High  
cufflinks 15.031     High  
cufflinks 14.896     High  

0 Strain