Gene : Sobic.004G154300 S. bicolor v3.1.1
Defline:  (1 of 1) K12164 - ubiquitin-like modifier-activating enzyme 5 (UBA5, UBE1DC1) Genomic Order:  1602
Name:  ? Sobic.004G154300 Secondary Identifier:  ? PAC:37931672
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6823 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G154300 0.5kb upstream 0.5kb upstream 7219 true Chr04: 48851950-48859168 Sorghum bicolor
Sobic.004G154300 0.5kb upstream 0.5kb upstream 500 false Chr04: 48851950-48852449 Sorghum bicolor
Sobic.004G154300 0.5kb downstream 0.5kb downstream 7219 true Chr04: 48852450-48859668 Sorghum bicolor
Sobic.004G154300 0.5kb downstream 0.5kb downstream 500 false Chr04: 48859169-48859668 Sorghum bicolor
Sobic.004G154300 1.0kb upstream 1.0kb upstream 7719 true Chr04: 48851450-48859168 Sorghum bicolor
Sobic.004G154300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 48851450-48852449 Sorghum bicolor
Sobic.004G154300 1.0kb downstream 1.0kb downstream 7719 true Chr04: 48852450-48860168 Sorghum bicolor
Sobic.004G154300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 48859169-48860168 Sorghum bicolor
Sobic.004G154300 2.0kb upstream 2.0kb upstream 8719 true Chr04: 48850450-48859168 Sorghum bicolor
Sobic.004G154300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 48850450-48852449 Sorghum bicolor
Sobic.004G154300 2.0kb downstream 2.0kb downstream 8719 true Chr04: 48852450-48861168 Sorghum bicolor
Sobic.004G154300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 48859169-48861168 Sorghum bicolor
Sobic.004G154300 5.0kb upstream 5.0kb upstream 11719 true Chr04: 48847450-48859168 Sorghum bicolor
Sobic.004G154300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 48847450-48852449 Sorghum bicolor
Sobic.004G154300 5.0kb downstream 5.0kb downstream 11719 true Chr04: 48852450-48864168 Sorghum bicolor
Sobic.004G154300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 48859169-48864168 Sorghum bicolor
Sobic.004G154300 10.0kb upstream 10.0kb upstream 16719 true Chr04: 48842450-48859168 Sorghum bicolor
Sobic.004G154300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 48842450-48852449 Sorghum bicolor
Sobic.004G154300 10.0kb downstream 10.0kb downstream 16719 true Chr04: 48852450-48869168 Sorghum bicolor
Sobic.004G154300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 48859169-48869168 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175473 5267 Panicoideae View MSA
124579190 5269 Grass View MSA
122041922 5273 Angiosperm View MSA
121347564 5274 Embryophyte View MSA
123424275 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.977     High High
cufflinks 2.926       Low
cufflinks 5.771        
cufflinks 9.723        
cufflinks 8.177        
cufflinks 9.837        
cufflinks 6.236        
cufflinks 3.846       Low
cufflinks 12.003       High
cufflinks 10.847        
cufflinks 9.661        
cufflinks 8.363        
cufflinks 12.286     High High
cufflinks 8.388        
cufflinks 9.844        
cufflinks 4.256       Low
cufflinks 6.022        
cufflinks 6.572        
cufflinks 4.238       Low
cufflinks 8.162        
cufflinks 7.247        
cufflinks 14.244     High High
cufflinks 9.898        
cufflinks 9.924        
cufflinks 4.827       Low
cufflinks 3.301       Low
cufflinks 10.283        
cufflinks 3.487       Low
cufflinks 6.873        
cufflinks 11.17        

0 Strain