Gene : Sobic.004G208800 S. bicolor v3.1.1
Defline:  weakly similar to Os09g0103200 protein Genomic Order:  2174
Name:  ? Sobic.004G208800 Secondary Identifier:  ? PAC:37932458
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G208800 0.5kb upstream 0.5kb upstream 4271 true Chr04: 55857261-55861531 Sorghum bicolor
Sobic.004G208800 0.5kb upstream 0.5kb upstream 500 false Chr04: 55857261-55857760 Sorghum bicolor
Sobic.004G208800 0.5kb downstream 0.5kb downstream 4271 true Chr04: 55857761-55862031 Sorghum bicolor
Sobic.004G208800 0.5kb downstream 0.5kb downstream 500 false Chr04: 55861532-55862031 Sorghum bicolor
Sobic.004G208800 1.0kb upstream 1.0kb upstream 4771 true Chr04: 55856761-55861531 Sorghum bicolor
Sobic.004G208800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55856761-55857760 Sorghum bicolor
Sobic.004G208800 1.0kb downstream 1.0kb downstream 4771 true Chr04: 55857761-55862531 Sorghum bicolor
Sobic.004G208800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55861532-55862531 Sorghum bicolor
Sobic.004G208800 2.0kb upstream 2.0kb upstream 5771 true Chr04: 55855761-55861531 Sorghum bicolor
Sobic.004G208800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55855761-55857760 Sorghum bicolor
Sobic.004G208800 2.0kb downstream 2.0kb downstream 5771 true Chr04: 55857761-55863531 Sorghum bicolor
Sobic.004G208800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55861532-55863531 Sorghum bicolor
Sobic.004G208800 5.0kb upstream 5.0kb upstream 8771 true Chr04: 55852761-55861531 Sorghum bicolor
Sobic.004G208800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55852761-55857760 Sorghum bicolor
Sobic.004G208800 5.0kb downstream 5.0kb downstream 8771 true Chr04: 55857761-55866531 Sorghum bicolor
Sobic.004G208800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55861532-55866531 Sorghum bicolor
Sobic.004G208800 10.0kb upstream 10.0kb upstream 13771 true Chr04: 55847761-55861531 Sorghum bicolor
Sobic.004G208800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55847761-55857760 Sorghum bicolor
Sobic.004G208800 10.0kb downstream 10.0kb downstream 13771 true Chr04: 55857761-55871531 Sorghum bicolor
Sobic.004G208800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55861532-55871531 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175643 5267 Panicoideae View MSA
124584826 5269 Grass View MSA
122046829 5273 Angiosperm View MSA
121348564 5274 Embryophyte View MSA
123380915 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.375        
cufflinks 0.142       Low
cufflinks 1.822       High
cufflinks 0.545        
cufflinks 0.835        
cufflinks 0.45        
cufflinks 0.21        
cufflinks 0.241        
cufflinks 0.498        
cufflinks 0.61        
cufflinks 0.208        
cufflinks 0.241        
cufflinks 0.69        
cufflinks 0.21        
cufflinks 0.833        
cufflinks 0.265        
cufflinks 0.22        
cufflinks 0.214        
cufflinks 0.761        
cufflinks 0.323        
cufflinks 1.707       High
cufflinks 0.415        
cufflinks 0.251        
cufflinks 0.307        
cufflinks 0.214        
cufflinks 0.225        
cufflinks 0.485        
cufflinks 0.154       Low
cufflinks 0.09       Low
cufflinks 0.381        

0 Strain