Gene : Sobic.004G206300 S. bicolor v3.1.1
Defline:  (1 of 1) K12870 - pre-mRNA-splicing factor ISY1 (ISY1) Genomic Order:  2146
Name:  ? Sobic.004G206300 Secondary Identifier:  ? PAC:37930559
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G206300 0.5kb upstream 0.5kb upstream 3317 true Chr04: 55700796-55704112 Sorghum bicolor
Sobic.004G206300 0.5kb upstream 0.5kb upstream 500 false Chr04: 55703613-55704112 Sorghum bicolor
Sobic.004G206300 0.5kb downstream 0.5kb downstream 3317 true Chr04: 55700296-55703612 Sorghum bicolor
Sobic.004G206300 0.5kb downstream 0.5kb downstream 500 false Chr04: 55700296-55700795 Sorghum bicolor
Sobic.004G206300 1.0kb upstream 1.0kb upstream 3817 true Chr04: 55700796-55704612 Sorghum bicolor
Sobic.004G206300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55703613-55704612 Sorghum bicolor
Sobic.004G206300 1.0kb downstream 1.0kb downstream 3817 true Chr04: 55699796-55703612 Sorghum bicolor
Sobic.004G206300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55699796-55700795 Sorghum bicolor
Sobic.004G206300 2.0kb upstream 2.0kb upstream 4817 true Chr04: 55700796-55705612 Sorghum bicolor
Sobic.004G206300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55703613-55705612 Sorghum bicolor
Sobic.004G206300 2.0kb downstream 2.0kb downstream 4817 true Chr04: 55698796-55703612 Sorghum bicolor
Sobic.004G206300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55698796-55700795 Sorghum bicolor
Sobic.004G206300 5.0kb upstream 5.0kb upstream 7817 true Chr04: 55700796-55708612 Sorghum bicolor
Sobic.004G206300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55703613-55708612 Sorghum bicolor
Sobic.004G206300 5.0kb downstream 5.0kb downstream 7817 true Chr04: 55695796-55703612 Sorghum bicolor
Sobic.004G206300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55695796-55700795 Sorghum bicolor
Sobic.004G206300 10.0kb upstream 10.0kb upstream 12817 true Chr04: 55700796-55713612 Sorghum bicolor
Sobic.004G206300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55703613-55713612 Sorghum bicolor
Sobic.004G206300 10.0kb downstream 10.0kb downstream 12817 true Chr04: 55690796-55703612 Sorghum bicolor
Sobic.004G206300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55690796-55700795 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183488 5267 Panicoideae View MSA
124574276 5269 Grass View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.78     High High
cufflinks 0.796       Low
cufflinks 1.331       Low
cufflinks 4.288        
cufflinks 5.552        
cufflinks 5.448        
cufflinks 4.688        
cufflinks 1.571       Low
cufflinks 6.071        
cufflinks 6.666        
cufflinks 4.458        
cufflinks 4.599        
cufflinks 4.781        
cufflinks 6.181        
cufflinks 5.018        
cufflinks 2.425        
cufflinks 5.023        
cufflinks 4.925        
cufflinks 1.749       Low
cufflinks 5.672        
cufflinks 10.558       High
cufflinks 7.362        
cufflinks 5.622        
cufflinks 5.826        
cufflinks 1.53       Low
cufflinks 0.742       Low
cufflinks 2.679        
cufflinks 17.472     High High
cufflinks 3.533        
cufflinks 7.623        

0 Strain