Gene : Sobic.004G202200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2099
Name:  ? Sobic.004G202200 Secondary Identifier:  ? PAC:37930982
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G202200 0.5kb upstream 0.5kb upstream 7069 true Chr04: 55440120-55447188 Sorghum bicolor
Sobic.004G202200 0.5kb upstream 0.5kb upstream 500 false Chr04: 55440120-55440619 Sorghum bicolor
Sobic.004G202200 0.5kb downstream 0.5kb downstream 7069 true Chr04: 55440620-55447688 Sorghum bicolor
Sobic.004G202200 0.5kb downstream 0.5kb downstream 500 false Chr04: 55447189-55447688 Sorghum bicolor
Sobic.004G202200 1.0kb upstream 1.0kb upstream 7569 true Chr04: 55439620-55447188 Sorghum bicolor
Sobic.004G202200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55439620-55440619 Sorghum bicolor
Sobic.004G202200 1.0kb downstream 1.0kb downstream 7569 true Chr04: 55440620-55448188 Sorghum bicolor
Sobic.004G202200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55447189-55448188 Sorghum bicolor
Sobic.004G202200 2.0kb upstream 2.0kb upstream 8569 true Chr04: 55438620-55447188 Sorghum bicolor
Sobic.004G202200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55438620-55440619 Sorghum bicolor
Sobic.004G202200 2.0kb downstream 2.0kb downstream 8569 true Chr04: 55440620-55449188 Sorghum bicolor
Sobic.004G202200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55447189-55449188 Sorghum bicolor
Sobic.004G202200 5.0kb upstream 5.0kb upstream 11569 true Chr04: 55435620-55447188 Sorghum bicolor
Sobic.004G202200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55435620-55440619 Sorghum bicolor
Sobic.004G202200 5.0kb downstream 5.0kb downstream 11569 true Chr04: 55440620-55452188 Sorghum bicolor
Sobic.004G202200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55447189-55452188 Sorghum bicolor
Sobic.004G202200 10.0kb upstream 10.0kb upstream 16569 true Chr04: 55430620-55447188 Sorghum bicolor
Sobic.004G202200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55430620-55440619 Sorghum bicolor
Sobic.004G202200 10.0kb downstream 10.0kb downstream 16569 true Chr04: 55440620-55457188 Sorghum bicolor
Sobic.004G202200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55447189-55457188 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194009 5267 Panicoideae View MSA
124576815 5269 Grass View MSA
122044258 5273 Angiosperm View MSA
121344643 5274 Embryophyte View MSA
123380078 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.125        
cufflinks 141.11     High High
cufflinks 46.046     High  
cufflinks 17.156     High  
cufflinks 4.744        
cufflinks 19.26     High  
cufflinks 88.996     High High
cufflinks 72.226     High High
cufflinks 3.419        
cufflinks 3.258        
cufflinks 1.188       Low
cufflinks 1.632        
cufflinks 2.801        
cufflinks 1.468       Low
cufflinks 9.009        
cufflinks 100.219     High High
cufflinks 74.948     High High
cufflinks 88.366     High High
cufflinks 48.728     High High
cufflinks 49.515     High High
cufflinks 4.404        
cufflinks 1.219       Low
cufflinks 1.293       Low
cufflinks 1.56       Low
cufflinks 59.099     High High
cufflinks 96.871     High High
cufflinks 1.197       Low
cufflinks 2.184        
cufflinks 115.344     High High
cufflinks 9.784        

0 Strain