Gene : Sobic.004G203400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  2113
Name:  ? Sobic.004G203400 Secondary Identifier:  ? PAC:37930024
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G203400 0.5kb upstream 0.5kb upstream 4790 true Chr04: 55511733-55516522 Sorghum bicolor
Sobic.004G203400 0.5kb upstream 0.5kb upstream 500 false Chr04: 55516023-55516522 Sorghum bicolor
Sobic.004G203400 0.5kb downstream 0.5kb downstream 4790 true Chr04: 55511233-55516022 Sorghum bicolor
Sobic.004G203400 0.5kb downstream 0.5kb downstream 500 false Chr04: 55511233-55511732 Sorghum bicolor
Sobic.004G203400 1.0kb upstream 1.0kb upstream 5290 true Chr04: 55511733-55517022 Sorghum bicolor
Sobic.004G203400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55516023-55517022 Sorghum bicolor
Sobic.004G203400 1.0kb downstream 1.0kb downstream 5290 true Chr04: 55510733-55516022 Sorghum bicolor
Sobic.004G203400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55510733-55511732 Sorghum bicolor
Sobic.004G203400 2.0kb upstream 2.0kb upstream 6290 true Chr04: 55511733-55518022 Sorghum bicolor
Sobic.004G203400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55516023-55518022 Sorghum bicolor
Sobic.004G203400 2.0kb downstream 2.0kb downstream 6290 true Chr04: 55509733-55516022 Sorghum bicolor
Sobic.004G203400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55509733-55511732 Sorghum bicolor
Sobic.004G203400 5.0kb upstream 5.0kb upstream 9290 true Chr04: 55511733-55521022 Sorghum bicolor
Sobic.004G203400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55516023-55521022 Sorghum bicolor
Sobic.004G203400 5.0kb downstream 5.0kb downstream 9290 true Chr04: 55506733-55516022 Sorghum bicolor
Sobic.004G203400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55506733-55511732 Sorghum bicolor
Sobic.004G203400 10.0kb upstream 10.0kb upstream 14290 true Chr04: 55511733-55526022 Sorghum bicolor
Sobic.004G203400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55516023-55526022 Sorghum bicolor
Sobic.004G203400 10.0kb downstream 10.0kb downstream 14290 true Chr04: 55501733-55516022 Sorghum bicolor
Sobic.004G203400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55501733-55511732 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191503 5267 Panicoideae View MSA
124573497 5269 Grass View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.001       Low
cufflinks 43.343     High  
cufflinks 60.308     High High
cufflinks 51.492     High High
cufflinks 14.944     High  
cufflinks 39.596     High  
cufflinks 49.639     High High
cufflinks 32.605     High  
cufflinks 16.869     High  
cufflinks 19.163     High  
cufflinks 23.946     High  
cufflinks 20.555     High  
cufflinks 27.792     High  
cufflinks 15.31     High  
cufflinks 32.877     High  
cufflinks 62.118     High High
cufflinks 55.23     High High
cufflinks 53.209     High High
cufflinks 63.312     High High
cufflinks 41.402     High  
cufflinks 14.754     High  
cufflinks 12.291     High Low
cufflinks 23.353     High  
cufflinks 19.539     High  
cufflinks 34.637     High  
cufflinks 35.338     High  
cufflinks 21.634     High  
cufflinks 6.148       Low
cufflinks 27.211     High  
cufflinks 23.835     High  

0 Strain