Gene : Sobic.004G200700 S. bicolor v3.1.1
Defline:  (1 of 171) PF00847 - AP2 domain (AP2) Genomic Order:  2083
Name:  ? Sobic.004G200700 Secondary Identifier:  ? PAC:37931324
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G200700 0.5kb upstream 0.5kb upstream 1433 true Chr04: 55120562-55121994 Sorghum bicolor
Sobic.004G200700 0.5kb upstream 0.5kb upstream 500 false Chr04: 55120562-55121061 Sorghum bicolor
Sobic.004G200700 0.5kb downstream 0.5kb downstream 1433 true Chr04: 55121062-55122494 Sorghum bicolor
Sobic.004G200700 0.5kb downstream 0.5kb downstream 500 false Chr04: 55121995-55122494 Sorghum bicolor
Sobic.004G200700 1.0kb upstream 1.0kb upstream 1933 true Chr04: 55120062-55121994 Sorghum bicolor
Sobic.004G200700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55120062-55121061 Sorghum bicolor
Sobic.004G200700 1.0kb downstream 1.0kb downstream 1933 true Chr04: 55121062-55122994 Sorghum bicolor
Sobic.004G200700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55121995-55122994 Sorghum bicolor
Sobic.004G200700 2.0kb upstream 2.0kb upstream 2933 true Chr04: 55119062-55121994 Sorghum bicolor
Sobic.004G200700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55119062-55121061 Sorghum bicolor
Sobic.004G200700 2.0kb downstream 2.0kb downstream 2933 true Chr04: 55121062-55123994 Sorghum bicolor
Sobic.004G200700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55121995-55123994 Sorghum bicolor
Sobic.004G200700 5.0kb upstream 5.0kb upstream 5933 true Chr04: 55116062-55121994 Sorghum bicolor
Sobic.004G200700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55116062-55121061 Sorghum bicolor
Sobic.004G200700 5.0kb downstream 5.0kb downstream 5933 true Chr04: 55121062-55126994 Sorghum bicolor
Sobic.004G200700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55121995-55126994 Sorghum bicolor
Sobic.004G200700 10.0kb upstream 10.0kb upstream 10933 true Chr04: 55111062-55121994 Sorghum bicolor
Sobic.004G200700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55111062-55121061 Sorghum bicolor
Sobic.004G200700 10.0kb downstream 10.0kb downstream 10933 true Chr04: 55121062-55131994 Sorghum bicolor
Sobic.004G200700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55121995-55131994 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199421 5267 Panicoideae View MSA
124579993 5269 Grass View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.27        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain