Gene : Sobic.004G202000 S. bicolor v3.1.1
Defline:  (1 of 1) PF03879 - Cgr1 family (Cgr1) Genomic Order:  2097
Name:  ? Sobic.004G202000 Secondary Identifier:  ? PAC:37933589
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G202000 0.5kb upstream 0.5kb upstream 1975 true Chr04: 55424942-55426916 Sorghum bicolor
Sobic.004G202000 0.5kb upstream 0.5kb upstream 500 false Chr04: 55426417-55426916 Sorghum bicolor
Sobic.004G202000 0.5kb downstream 0.5kb downstream 1975 true Chr04: 55424442-55426416 Sorghum bicolor
Sobic.004G202000 0.5kb downstream 0.5kb downstream 500 false Chr04: 55424442-55424941 Sorghum bicolor
Sobic.004G202000 1.0kb upstream 1.0kb upstream 2475 true Chr04: 55424942-55427416 Sorghum bicolor
Sobic.004G202000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55426417-55427416 Sorghum bicolor
Sobic.004G202000 1.0kb downstream 1.0kb downstream 2475 true Chr04: 55423942-55426416 Sorghum bicolor
Sobic.004G202000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55423942-55424941 Sorghum bicolor
Sobic.004G202000 2.0kb upstream 2.0kb upstream 3475 true Chr04: 55424942-55428416 Sorghum bicolor
Sobic.004G202000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55426417-55428416 Sorghum bicolor
Sobic.004G202000 2.0kb downstream 2.0kb downstream 3475 true Chr04: 55422942-55426416 Sorghum bicolor
Sobic.004G202000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55422942-55424941 Sorghum bicolor
Sobic.004G202000 5.0kb upstream 5.0kb upstream 6475 true Chr04: 55424942-55431416 Sorghum bicolor
Sobic.004G202000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55426417-55431416 Sorghum bicolor
Sobic.004G202000 5.0kb downstream 5.0kb downstream 6475 true Chr04: 55419942-55426416 Sorghum bicolor
Sobic.004G202000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55419942-55424941 Sorghum bicolor
Sobic.004G202000 10.0kb upstream 10.0kb upstream 11475 true Chr04: 55424942-55436416 Sorghum bicolor
Sobic.004G202000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55426417-55436416 Sorghum bicolor
Sobic.004G202000 10.0kb downstream 10.0kb downstream 11475 true Chr04: 55414942-55426416 Sorghum bicolor
Sobic.004G202000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55414942-55424941 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188250 5267 Panicoideae View MSA
124573962 5269 Grass View MSA
122044383 5273 Angiosperm View MSA
121348750 5274 Embryophyte View MSA
123426387 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.363     High High
cufflinks 0.307       Low
cufflinks 0.893       Low
cufflinks 4.66        
cufflinks 3.08        
cufflinks 3.057        
cufflinks 1.963        
cufflinks 0.375       Low
cufflinks 2.619        
cufflinks 2.888        
cufflinks 3.467        
cufflinks 2.178        
cufflinks 1.666        
cufflinks 3.937        
cufflinks 2.286        
cufflinks 1.017        
cufflinks 2.224        
cufflinks 1.797        
cufflinks 1.597        
cufflinks 2.063        
cufflinks 4.121        
cufflinks 6.758       High
cufflinks 3.045        
cufflinks 3.957        
cufflinks 0.463       Low
cufflinks 0.216       Low
cufflinks 1.862        
cufflinks 26.368     High High
cufflinks 1.76        
cufflinks 3.205        

0 Strain