Gene : Sobic.004G199200 S. bicolor v3.1.1
Defline:  (1 of 1) K10858 - DNA mismatch repair protein PMS2 (PMS2) Genomic Order:  2069
Name:  ? Sobic.004G199200 Secondary Identifier:  ? PAC:37930606
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G199200 0.5kb upstream 0.5kb upstream 9056 true Chr04: 55024467-55033522 Sorghum bicolor
Sobic.004G199200 0.5kb upstream 0.5kb upstream 500 false Chr04: 55033023-55033522 Sorghum bicolor
Sobic.004G199200 0.5kb downstream 0.5kb downstream 9056 true Chr04: 55023967-55033022 Sorghum bicolor
Sobic.004G199200 0.5kb downstream 0.5kb downstream 500 false Chr04: 55023967-55024466 Sorghum bicolor
Sobic.004G199200 1.0kb upstream 1.0kb upstream 9556 true Chr04: 55024467-55034022 Sorghum bicolor
Sobic.004G199200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 55033023-55034022 Sorghum bicolor
Sobic.004G199200 1.0kb downstream 1.0kb downstream 9556 true Chr04: 55023467-55033022 Sorghum bicolor
Sobic.004G199200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 55023467-55024466 Sorghum bicolor
Sobic.004G199200 2.0kb upstream 2.0kb upstream 10556 true Chr04: 55024467-55035022 Sorghum bicolor
Sobic.004G199200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 55033023-55035022 Sorghum bicolor
Sobic.004G199200 2.0kb downstream 2.0kb downstream 10556 true Chr04: 55022467-55033022 Sorghum bicolor
Sobic.004G199200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 55022467-55024466 Sorghum bicolor
Sobic.004G199200 5.0kb upstream 5.0kb upstream 13556 true Chr04: 55024467-55038022 Sorghum bicolor
Sobic.004G199200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 55033023-55038022 Sorghum bicolor
Sobic.004G199200 5.0kb downstream 5.0kb downstream 13556 true Chr04: 55019467-55033022 Sorghum bicolor
Sobic.004G199200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 55019467-55024466 Sorghum bicolor
Sobic.004G199200 10.0kb upstream 10.0kb upstream 18556 true Chr04: 55024467-55043022 Sorghum bicolor
Sobic.004G199200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 55033023-55043022 Sorghum bicolor
Sobic.004G199200 10.0kb downstream 10.0kb downstream 18556 true Chr04: 55014467-55033022 Sorghum bicolor
Sobic.004G199200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 55014467-55024466 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196418 5267 Panicoideae View MSA
124588392 5269 Grass View MSA
122044481 5273 Angiosperm View MSA
121344102 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.332        
cufflinks 0.084       Low
cufflinks 0.133        
cufflinks 0.203        
cufflinks 0.916       High
cufflinks 0.369        
cufflinks 0.461        
cufflinks 0.091       Low
cufflinks 0.884       High
cufflinks 0.855       High
cufflinks 0.236        
cufflinks 0.332        
cufflinks 0.444        
cufflinks 0.229        
cufflinks 0.637        
cufflinks 0.125       Low
cufflinks 0.433        
cufflinks 0.525        
cufflinks 0.063     Low Low
cufflinks 0.404        
cufflinks 2.391       High
cufflinks 0.25        
cufflinks 0.305        
cufflinks 0.313        
cufflinks 0.108       Low
cufflinks 0.081       Low
cufflinks 0.282        
cufflinks 0.72       High
cufflinks 0.166        
cufflinks 1.031       High

0 Strain