Gene : Sobic.004G198000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24362//PTHR24362:SF255 - SERINE/THREONINE-PROTEIN KINASE NEK // SERINE/THREONINE-PROTEIN KINASE NEK1 Genomic Order:  2055
Name:  ? Sobic.004G198000 Secondary Identifier:  ? PAC:37930644
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G198000 0.5kb upstream 0.5kb upstream 4351 true Chr04: 54900294-54904644 Sorghum bicolor
Sobic.004G198000 0.5kb upstream 0.5kb upstream 500 false Chr04: 54904145-54904644 Sorghum bicolor
Sobic.004G198000 0.5kb downstream 0.5kb downstream 4351 true Chr04: 54899794-54904144 Sorghum bicolor
Sobic.004G198000 0.5kb downstream 0.5kb downstream 500 false Chr04: 54899794-54900293 Sorghum bicolor
Sobic.004G198000 1.0kb upstream 1.0kb upstream 4851 true Chr04: 54900294-54905144 Sorghum bicolor
Sobic.004G198000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54904145-54905144 Sorghum bicolor
Sobic.004G198000 1.0kb downstream 1.0kb downstream 4851 true Chr04: 54899294-54904144 Sorghum bicolor
Sobic.004G198000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54899294-54900293 Sorghum bicolor
Sobic.004G198000 2.0kb upstream 2.0kb upstream 5851 true Chr04: 54900294-54906144 Sorghum bicolor
Sobic.004G198000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54904145-54906144 Sorghum bicolor
Sobic.004G198000 2.0kb downstream 2.0kb downstream 5851 true Chr04: 54898294-54904144 Sorghum bicolor
Sobic.004G198000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54898294-54900293 Sorghum bicolor
Sobic.004G198000 5.0kb upstream 5.0kb upstream 8851 true Chr04: 54900294-54909144 Sorghum bicolor
Sobic.004G198000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54904145-54909144 Sorghum bicolor
Sobic.004G198000 5.0kb downstream 5.0kb downstream 8851 true Chr04: 54895294-54904144 Sorghum bicolor
Sobic.004G198000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54895294-54900293 Sorghum bicolor
Sobic.004G198000 10.0kb upstream 10.0kb upstream 13851 true Chr04: 54900294-54914144 Sorghum bicolor
Sobic.004G198000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54904145-54914144 Sorghum bicolor
Sobic.004G198000 10.0kb downstream 10.0kb downstream 13851 true Chr04: 54890294-54904144 Sorghum bicolor
Sobic.004G198000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54890294-54900293 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185120 5267 Panicoideae View MSA
124568412 5269 Grass View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.033     High Low
cufflinks 13.099     High Low
cufflinks 53.616     High  
cufflinks 34.637     High  
cufflinks 57.492     High  
cufflinks 78.227     High  
cufflinks 40.612     High  
cufflinks 66.013     High  
cufflinks 44.654     High  
cufflinks 41.852     High  
cufflinks 56.571     High  
cufflinks 42.135     High  
cufflinks 81.546     High High
cufflinks 49.618     High  
cufflinks 43.384     High  
cufflinks 11.337     High Low
cufflinks 36.391     High  
cufflinks 39.266     High  
cufflinks 49.689     High  
cufflinks 37.726     High  
cufflinks 16.873     High Low
cufflinks 53.694     High  
cufflinks 40.998     High  
cufflinks 44.136     High  
cufflinks 18.96     High Low
cufflinks 15.28     High Low
cufflinks 34.142     High  
cufflinks 2.052       Low
cufflinks 82.416     High High
cufflinks 30.65     High  

0 Strain