Gene : Sobic.004G197600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23344//PTHR23344:SF8 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE PROTEIN-RELATED Genomic Order:  2051
Name:  ? Sobic.004G197600 Secondary Identifier:  ? PAC:37930244
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7409 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G197600 0.5kb upstream 0.5kb upstream 5959 true Chr04: 54868563-54874521 Sorghum bicolor
Sobic.004G197600 0.5kb upstream 0.5kb upstream 500 false Chr04: 54868563-54869062 Sorghum bicolor
Sobic.004G197600 0.5kb downstream 0.5kb downstream 5959 true Chr04: 54869063-54875021 Sorghum bicolor
Sobic.004G197600 0.5kb downstream 0.5kb downstream 500 false Chr04: 54874522-54875021 Sorghum bicolor
Sobic.004G197600 1.0kb upstream 1.0kb upstream 6459 true Chr04: 54868063-54874521 Sorghum bicolor
Sobic.004G197600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54868063-54869062 Sorghum bicolor
Sobic.004G197600 1.0kb downstream 1.0kb downstream 6459 true Chr04: 54869063-54875521 Sorghum bicolor
Sobic.004G197600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54874522-54875521 Sorghum bicolor
Sobic.004G197600 2.0kb upstream 2.0kb upstream 7459 true Chr04: 54867063-54874521 Sorghum bicolor
Sobic.004G197600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54867063-54869062 Sorghum bicolor
Sobic.004G197600 2.0kb downstream 2.0kb downstream 7459 true Chr04: 54869063-54876521 Sorghum bicolor
Sobic.004G197600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54874522-54876521 Sorghum bicolor
Sobic.004G197600 5.0kb upstream 5.0kb upstream 10459 true Chr04: 54864063-54874521 Sorghum bicolor
Sobic.004G197600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54864063-54869062 Sorghum bicolor
Sobic.004G197600 5.0kb downstream 5.0kb downstream 10459 true Chr04: 54869063-54879521 Sorghum bicolor
Sobic.004G197600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54874522-54879521 Sorghum bicolor
Sobic.004G197600 10.0kb upstream 10.0kb upstream 15459 true Chr04: 54859063-54874521 Sorghum bicolor
Sobic.004G197600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54859063-54869062 Sorghum bicolor
Sobic.004G197600 10.0kb downstream 10.0kb downstream 15459 true Chr04: 54869063-54884521 Sorghum bicolor
Sobic.004G197600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54874522-54884521 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176009 5267 Panicoideae View MSA
124570308 5269 Grass View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.497     High  
cufflinks 18.497     High Low
cufflinks 236.522     High High
cufflinks 241.465     High High
cufflinks 135.063     High  
cufflinks 39.57     High  
cufflinks 47.296     High  
cufflinks 56.059     High  
cufflinks 28.516     High Low
cufflinks 44.235     High  
cufflinks 108.778     High  
cufflinks 54.217     High  
cufflinks 60.254     High  
cufflinks 94.394     High  
cufflinks 124.626     High  
cufflinks 24.805     High Low
cufflinks 44.798     High  
cufflinks 44.017     High  
cufflinks 92.469     High  
cufflinks 32.226     High Low
cufflinks 60.997     High  
cufflinks 119.421     High  
cufflinks 87.272     High  
cufflinks 101.878     High  
cufflinks 27.728     High Low
cufflinks 45.483     High  
cufflinks 124.321     High  
cufflinks 5.774       Low
cufflinks 67.171     High  
cufflinks 131.301     High  

0 Strain