Gene : Sobic.004G194100 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein OSJNBa0016D04.11 Genomic Order:  2018
Name:  ? Sobic.004G194100 Secondary Identifier:  ? PAC:37929146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G194100 0.5kb upstream 0.5kb upstream 5214 true Chr04: 54578697-54583910 Sorghum bicolor
Sobic.004G194100 0.5kb upstream 0.5kb upstream 500 false Chr04: 54583411-54583910 Sorghum bicolor
Sobic.004G194100 0.5kb downstream 0.5kb downstream 5214 true Chr04: 54578197-54583410 Sorghum bicolor
Sobic.004G194100 0.5kb downstream 0.5kb downstream 500 false Chr04: 54578197-54578696 Sorghum bicolor
Sobic.004G194100 1.0kb upstream 1.0kb upstream 5714 true Chr04: 54578697-54584410 Sorghum bicolor
Sobic.004G194100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54583411-54584410 Sorghum bicolor
Sobic.004G194100 1.0kb downstream 1.0kb downstream 5714 true Chr04: 54577697-54583410 Sorghum bicolor
Sobic.004G194100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54577697-54578696 Sorghum bicolor
Sobic.004G194100 2.0kb upstream 2.0kb upstream 6714 true Chr04: 54578697-54585410 Sorghum bicolor
Sobic.004G194100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54583411-54585410 Sorghum bicolor
Sobic.004G194100 2.0kb downstream 2.0kb downstream 6714 true Chr04: 54576697-54583410 Sorghum bicolor
Sobic.004G194100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54576697-54578696 Sorghum bicolor
Sobic.004G194100 5.0kb upstream 5.0kb upstream 9714 true Chr04: 54578697-54588410 Sorghum bicolor
Sobic.004G194100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54583411-54588410 Sorghum bicolor
Sobic.004G194100 5.0kb downstream 5.0kb downstream 9714 true Chr04: 54573697-54583410 Sorghum bicolor
Sobic.004G194100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54573697-54578696 Sorghum bicolor
Sobic.004G194100 10.0kb upstream 10.0kb upstream 14714 true Chr04: 54578697-54593410 Sorghum bicolor
Sobic.004G194100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54583411-54593410 Sorghum bicolor
Sobic.004G194100 10.0kb downstream 10.0kb downstream 14714 true Chr04: 54568697-54583410 Sorghum bicolor
Sobic.004G194100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54568697-54578696 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184225 5267 Panicoideae View MSA
124584684 5269 Grass View MSA
122045033 5273 Angiosperm View MSA
121310389 5274 Embryophyte View MSA
123347885 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.439        
cufflinks 0.316       Low
cufflinks 0.409       Low
cufflinks 1.098        
cufflinks 2.234        
cufflinks 1.367        
cufflinks 2.448        
cufflinks 1.173        
cufflinks 1.733        
cufflinks 1.8        
cufflinks 1.93        
cufflinks 2.298        
cufflinks 1.198        
cufflinks 1.847        
cufflinks 1.163        
cufflinks 0.571       Low
cufflinks 3.012       High
cufflinks 2.825       High
cufflinks 0.568       Low
cufflinks 3.598       High
cufflinks 3.328       High
cufflinks 2.034        
cufflinks 2.261        
cufflinks 2.145        
cufflinks 0.513       Low
cufflinks 0.327       Low
cufflinks 1.197        
cufflinks 0.67       Low
cufflinks 1.863        
cufflinks 1.765        

0 Strain