Gene : Sobic.004G191200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33399//PTHR33399:SF5 - FAMILY NOT NAMED // PSBQ-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  1987
Name:  ? Sobic.004G191200 Secondary Identifier:  ? PAC:37932314
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G191200 0.5kb upstream 0.5kb upstream 1751 true Chr04: 54308040-54309790 Sorghum bicolor
Sobic.004G191200 0.5kb upstream 0.5kb upstream 500 false Chr04: 54309291-54309790 Sorghum bicolor
Sobic.004G191200 0.5kb downstream 0.5kb downstream 1751 true Chr04: 54307540-54309290 Sorghum bicolor
Sobic.004G191200 0.5kb downstream 0.5kb downstream 500 false Chr04: 54307540-54308039 Sorghum bicolor
Sobic.004G191200 1.0kb upstream 1.0kb upstream 2251 true Chr04: 54308040-54310290 Sorghum bicolor
Sobic.004G191200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 54309291-54310290 Sorghum bicolor
Sobic.004G191200 1.0kb downstream 1.0kb downstream 2251 true Chr04: 54307040-54309290 Sorghum bicolor
Sobic.004G191200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 54307040-54308039 Sorghum bicolor
Sobic.004G191200 2.0kb upstream 2.0kb upstream 3251 true Chr04: 54308040-54311290 Sorghum bicolor
Sobic.004G191200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 54309291-54311290 Sorghum bicolor
Sobic.004G191200 2.0kb downstream 2.0kb downstream 3251 true Chr04: 54306040-54309290 Sorghum bicolor
Sobic.004G191200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 54306040-54308039 Sorghum bicolor
Sobic.004G191200 5.0kb upstream 5.0kb upstream 6251 true Chr04: 54308040-54314290 Sorghum bicolor
Sobic.004G191200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 54309291-54314290 Sorghum bicolor
Sobic.004G191200 5.0kb downstream 5.0kb downstream 6251 true Chr04: 54303040-54309290 Sorghum bicolor
Sobic.004G191200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 54303040-54308039 Sorghum bicolor
Sobic.004G191200 10.0kb upstream 10.0kb upstream 11251 true Chr04: 54308040-54319290 Sorghum bicolor
Sobic.004G191200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 54309291-54319290 Sorghum bicolor
Sobic.004G191200 10.0kb downstream 10.0kb downstream 11251 true Chr04: 54298040-54309290 Sorghum bicolor
Sobic.004G191200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 54298040-54308039 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191132 5267 Panicoideae View MSA
124586751 5269 Grass View MSA
122043406 5273 Angiosperm View MSA
121310117 5274 Embryophyte View MSA
123347693 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.298        
cufflinks 9.285     High High
cufflinks 2.842        
cufflinks 0.241        
cufflinks 0.032     Low Low
cufflinks 1.036        
cufflinks 9.948       High
cufflinks 21.337     High High
cufflinks 0.155        
cufflinks 0.136        
cufflinks 0.108        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low Low
cufflinks 0.043     Low  
cufflinks 1.116        
cufflinks 2.5        
cufflinks 10.302       High
cufflinks 16.482     High High
cufflinks 2.527        
cufflinks 1.88        
cufflinks 0.169        
cufflinks 0.111     Low  
cufflinks 0.012     Low Low
cufflinks 0.048     Low  
cufflinks 0.632        
cufflinks 16.761     High High
cufflinks 0.039     Low Low
cufflinks 0.018     Low Low
cufflinks 17.224     High High
cufflinks 0.334        

0 Strain