Gene : Sobic.004G185900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11214:SF74 - BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED Genomic Order:  1935
Name:  ? Sobic.004G185900 Secondary Identifier:  ? PAC:37930590
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G185900 0.5kb upstream 0.5kb upstream 6474 true Chr04: 53856329-53862802 Sorghum bicolor
Sobic.004G185900 0.5kb upstream 0.5kb upstream 500 false Chr04: 53862303-53862802 Sorghum bicolor
Sobic.004G185900 0.5kb downstream 0.5kb downstream 6474 true Chr04: 53855829-53862302 Sorghum bicolor
Sobic.004G185900 0.5kb downstream 0.5kb downstream 500 false Chr04: 53855829-53856328 Sorghum bicolor
Sobic.004G185900 1.0kb upstream 1.0kb upstream 6974 true Chr04: 53856329-53863302 Sorghum bicolor
Sobic.004G185900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 53862303-53863302 Sorghum bicolor
Sobic.004G185900 1.0kb downstream 1.0kb downstream 6974 true Chr04: 53855329-53862302 Sorghum bicolor
Sobic.004G185900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 53855329-53856328 Sorghum bicolor
Sobic.004G185900 2.0kb upstream 2.0kb upstream 7974 true Chr04: 53856329-53864302 Sorghum bicolor
Sobic.004G185900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 53862303-53864302 Sorghum bicolor
Sobic.004G185900 2.0kb downstream 2.0kb downstream 7974 true Chr04: 53854329-53862302 Sorghum bicolor
Sobic.004G185900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 53854329-53856328 Sorghum bicolor
Sobic.004G185900 5.0kb upstream 5.0kb upstream 10974 true Chr04: 53856329-53867302 Sorghum bicolor
Sobic.004G185900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 53862303-53867302 Sorghum bicolor
Sobic.004G185900 5.0kb downstream 5.0kb downstream 10974 true Chr04: 53851329-53862302 Sorghum bicolor
Sobic.004G185900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 53851329-53856328 Sorghum bicolor
Sobic.004G185900 10.0kb upstream 10.0kb upstream 15974 true Chr04: 53856329-53872302 Sorghum bicolor
Sobic.004G185900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 53862303-53872302 Sorghum bicolor
Sobic.004G185900 10.0kb downstream 10.0kb downstream 15974 true Chr04: 53846329-53862302 Sorghum bicolor
Sobic.004G185900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 53846329-53856328 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175372 5267 Panicoideae View MSA
124573382 5269 Grass View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.087     High High
cufflinks 1.229       Low
cufflinks 6.816        
cufflinks 15.712     High  
cufflinks 23.956     High High
cufflinks 6.99        
cufflinks 9.995        
cufflinks 5.103        
cufflinks 12.468     High  
cufflinks 15.709     High  
cufflinks 12.259     High  
cufflinks 11.471        
cufflinks 21.893     High  
cufflinks 12.509     High  
cufflinks 8.884        
cufflinks 3.115       Low
cufflinks 10.989        
cufflinks 11.276        
cufflinks 6.021        
cufflinks 12.169     High  
cufflinks 20.932     High  
cufflinks 14.175     High  
cufflinks 12.228     High  
cufflinks 12.118     High  
cufflinks 2.151       Low
cufflinks 1.194       Low
cufflinks 9.498        
cufflinks 7.589        
cufflinks 12.892     High  
cufflinks 11.011        

0 Strain