Gene : Sobic.004G186200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10438:SF229 - THIOREDOXIN-LIKE 4, CHLOROPLASTIC Genomic Order:  1938
Name:  ? Sobic.004G186200 Secondary Identifier:  ? PAC:37931879
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G186200 0.5kb upstream 0.5kb upstream 1240 true Chr04: 53874277-53875516 Sorghum bicolor
Sobic.004G186200 0.5kb upstream 0.5kb upstream 500 false Chr04: 53875017-53875516 Sorghum bicolor
Sobic.004G186200 0.5kb downstream 0.5kb downstream 1240 true Chr04: 53873777-53875016 Sorghum bicolor
Sobic.004G186200 0.5kb downstream 0.5kb downstream 500 false Chr04: 53873777-53874276 Sorghum bicolor
Sobic.004G186200 1.0kb upstream 1.0kb upstream 1740 true Chr04: 53874277-53876016 Sorghum bicolor
Sobic.004G186200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 53875017-53876016 Sorghum bicolor
Sobic.004G186200 1.0kb downstream 1.0kb downstream 1740 true Chr04: 53873277-53875016 Sorghum bicolor
Sobic.004G186200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 53873277-53874276 Sorghum bicolor
Sobic.004G186200 2.0kb upstream 2.0kb upstream 2740 true Chr04: 53874277-53877016 Sorghum bicolor
Sobic.004G186200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 53875017-53877016 Sorghum bicolor
Sobic.004G186200 2.0kb downstream 2.0kb downstream 2740 true Chr04: 53872277-53875016 Sorghum bicolor
Sobic.004G186200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 53872277-53874276 Sorghum bicolor
Sobic.004G186200 5.0kb upstream 5.0kb upstream 5740 true Chr04: 53874277-53880016 Sorghum bicolor
Sobic.004G186200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 53875017-53880016 Sorghum bicolor
Sobic.004G186200 5.0kb downstream 5.0kb downstream 5740 true Chr04: 53869277-53875016 Sorghum bicolor
Sobic.004G186200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 53869277-53874276 Sorghum bicolor
Sobic.004G186200 10.0kb upstream 10.0kb upstream 10740 true Chr04: 53874277-53885016 Sorghum bicolor
Sobic.004G186200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 53875017-53885016 Sorghum bicolor
Sobic.004G186200 10.0kb downstream 10.0kb downstream 10740 true Chr04: 53864277-53875016 Sorghum bicolor
Sobic.004G186200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 53864277-53874276 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175110 5267 Panicoideae View MSA
124578522 5269 Grass View MSA
122048480 5273 Angiosperm View MSA
121346716 5274 Embryophyte View MSA
123427646 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.021        
cufflinks 37.228     High High
cufflinks 25.925     High  
cufflinks 12.019        
cufflinks 9.942        
cufflinks 17.509     High  
cufflinks 16.448     High  
cufflinks 16.7     High  
cufflinks 7.385        
cufflinks 5.503        
cufflinks 0.281       Low
cufflinks 0.19       Low
cufflinks 5.349        
cufflinks 0.025     Low Low
cufflinks 9.855        
cufflinks 32.564     High High
cufflinks 11.646     High  
cufflinks 17.258     High  
cufflinks 21.503     High  
cufflinks 9.502        
cufflinks 5.26        
cufflinks 0.284       Low
cufflinks 0.094     Low Low
cufflinks 0.278       Low
cufflinks 27.598     High High
cufflinks 30.733     High High
cufflinks 0.423       Low
cufflinks 0.78        
cufflinks 18.214     High  
cufflinks 10.694        

0 Strain