Gene : Sobic.009G054900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21262//PTHR21262:SF12 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // CA2+-ACTIVATED RELA/SPOT-LIKE PROTEIN Genomic Order:  562
Name:  ? Sobic.009G054900 Secondary Identifier:  ? PAC:37922590
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G054900 0.5kb upstream 0.5kb upstream 3273 true Chr09: 5549752-5553024 Sorghum bicolor
Sobic.009G054900 0.5kb upstream 0.5kb upstream 500 false Chr09: 5549752-5550251 Sorghum bicolor
Sobic.009G054900 0.5kb downstream 0.5kb downstream 3273 true Chr09: 5550252-5553524 Sorghum bicolor
Sobic.009G054900 0.5kb downstream 0.5kb downstream 500 false Chr09: 5553025-5553524 Sorghum bicolor
Sobic.009G054900 1.0kb upstream 1.0kb upstream 3773 true Chr09: 5549252-5553024 Sorghum bicolor
Sobic.009G054900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5549252-5550251 Sorghum bicolor
Sobic.009G054900 1.0kb downstream 1.0kb downstream 3773 true Chr09: 5550252-5554024 Sorghum bicolor
Sobic.009G054900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5553025-5554024 Sorghum bicolor
Sobic.009G054900 2.0kb upstream 2.0kb upstream 4773 true Chr09: 5548252-5553024 Sorghum bicolor
Sobic.009G054900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5548252-5550251 Sorghum bicolor
Sobic.009G054900 2.0kb downstream 2.0kb downstream 4773 true Chr09: 5550252-5555024 Sorghum bicolor
Sobic.009G054900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5553025-5555024 Sorghum bicolor
Sobic.009G054900 5.0kb upstream 5.0kb upstream 7773 true Chr09: 5545252-5553024 Sorghum bicolor
Sobic.009G054900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5545252-5550251 Sorghum bicolor
Sobic.009G054900 5.0kb downstream 5.0kb downstream 7773 true Chr09: 5550252-5558024 Sorghum bicolor
Sobic.009G054900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5553025-5558024 Sorghum bicolor
Sobic.009G054900 10.0kb upstream 10.0kb upstream 12773 true Chr09: 5540252-5553024 Sorghum bicolor
Sobic.009G054900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5540252-5550251 Sorghum bicolor
Sobic.009G054900 10.0kb downstream 10.0kb downstream 12773 true Chr09: 5550252-5563024 Sorghum bicolor
Sobic.009G054900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5553025-5563024 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178126 5267 Panicoideae View MSA
124571967 5269 Grass View MSA
122044373 5273 Angiosperm View MSA
121310285 5274 Embryophyte View MSA
123347812 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.604       Low
cufflinks 208.407     High High
cufflinks 100.589     High High
cufflinks 50.469     High  
cufflinks 1.698        
cufflinks 71.911     High High
cufflinks 55.865     High  
cufflinks 103.974     High High
cufflinks 3.787        
cufflinks 5.192        
cufflinks 2.209        
cufflinks 3.293        
cufflinks 7.852        
cufflinks 1.666       Low
cufflinks 22.512     High  
cufflinks 162.714     High High
cufflinks 54.662     High  
cufflinks 57.472     High  
cufflinks 128.341     High High
cufflinks 54.746     High  
cufflinks 2.522        
cufflinks 1.391       Low
cufflinks 2.856        
cufflinks 2.299        
cufflinks 107.43     High High
cufflinks 189.274     High High
cufflinks 2.575        
cufflinks 1.182       Low
cufflinks 38.308     High  
cufflinks 15.643     High  

0 Strain