Gene : Sobic.004G181500 S. bicolor v3.1.1
Defline:  (1 of 1) K10880 - DNA-repair protein XRCC3 (XRCC3) Genomic Order:  1892
Name:  ? Sobic.004G181500 Secondary Identifier:  ? PAC:37932839
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G181500 0.5kb upstream 0.5kb upstream 6969 true Chr04: 53430497-53437465 Sorghum bicolor
Sobic.004G181500 0.5kb upstream 0.5kb upstream 500 false Chr04: 53436966-53437465 Sorghum bicolor
Sobic.004G181500 0.5kb downstream 0.5kb downstream 6969 true Chr04: 53429997-53436965 Sorghum bicolor
Sobic.004G181500 0.5kb downstream 0.5kb downstream 500 false Chr04: 53429997-53430496 Sorghum bicolor
Sobic.004G181500 1.0kb upstream 1.0kb upstream 7469 true Chr04: 53430497-53437965 Sorghum bicolor
Sobic.004G181500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 53436966-53437965 Sorghum bicolor
Sobic.004G181500 1.0kb downstream 1.0kb downstream 7469 true Chr04: 53429497-53436965 Sorghum bicolor
Sobic.004G181500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 53429497-53430496 Sorghum bicolor
Sobic.004G181500 2.0kb upstream 2.0kb upstream 8469 true Chr04: 53430497-53438965 Sorghum bicolor
Sobic.004G181500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 53436966-53438965 Sorghum bicolor
Sobic.004G181500 2.0kb downstream 2.0kb downstream 8469 true Chr04: 53428497-53436965 Sorghum bicolor
Sobic.004G181500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 53428497-53430496 Sorghum bicolor
Sobic.004G181500 5.0kb upstream 5.0kb upstream 11469 true Chr04: 53430497-53441965 Sorghum bicolor
Sobic.004G181500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 53436966-53441965 Sorghum bicolor
Sobic.004G181500 5.0kb downstream 5.0kb downstream 11469 true Chr04: 53425497-53436965 Sorghum bicolor
Sobic.004G181500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 53425497-53430496 Sorghum bicolor
Sobic.004G181500 10.0kb upstream 10.0kb upstream 16469 true Chr04: 53430497-53446965 Sorghum bicolor
Sobic.004G181500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 53436966-53446965 Sorghum bicolor
Sobic.004G181500 10.0kb downstream 10.0kb downstream 16469 true Chr04: 53420497-53436965 Sorghum bicolor
Sobic.004G181500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 53420497-53430496 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187662 5267 Panicoideae View MSA
124577643 5269 Grass View MSA
122048125 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.113        
cufflinks 0.061        
cufflinks 0.071        
cufflinks 0.059     Low  
cufflinks 0.121        
cufflinks 0.159        
cufflinks 0.123        
cufflinks 0.022     Low Low
cufflinks 0.086        
cufflinks 0.076     Low  
cufflinks 0.137        
cufflinks 0.172       High
cufflinks 0.124        
cufflinks 0.195       High
cufflinks 0.069     Low  
cufflinks 0.033     Low Low
cufflinks 0.09     Low  
cufflinks 0.059     Low  
cufflinks 0.092     Low  
cufflinks 0.062     Low  
cufflinks 0.22       High
cufflinks 0.21       High
cufflinks 0.147        
cufflinks 0.178       High
cufflinks 0.08        
cufflinks 0.036     Low Low
cufflinks 0.065     Low  
cufflinks 0.18       High
cufflinks 0.032     Low Low
cufflinks 0.16        

0 Strain