Gene : Sobic.009G129100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10906//PTHR10906:SF2 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC Genomic Order:  1329
Name:  ? Sobic.009G129100 Secondary Identifier:  ? PAC:37920551
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G129100 0.5kb upstream 0.5kb upstream 9202 true Chr09: 48252938-48262139 Sorghum bicolor
Sobic.009G129100 0.5kb upstream 0.5kb upstream 500 false Chr09: 48261640-48262139 Sorghum bicolor
Sobic.009G129100 0.5kb downstream 0.5kb downstream 9202 true Chr09: 48252438-48261639 Sorghum bicolor
Sobic.009G129100 0.5kb downstream 0.5kb downstream 500 false Chr09: 48252438-48252937 Sorghum bicolor
Sobic.009G129100 1.0kb upstream 1.0kb upstream 9702 true Chr09: 48252938-48262639 Sorghum bicolor
Sobic.009G129100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48261640-48262639 Sorghum bicolor
Sobic.009G129100 1.0kb downstream 1.0kb downstream 9702 true Chr09: 48251938-48261639 Sorghum bicolor
Sobic.009G129100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48251938-48252937 Sorghum bicolor
Sobic.009G129100 2.0kb upstream 2.0kb upstream 10702 true Chr09: 48252938-48263639 Sorghum bicolor
Sobic.009G129100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48261640-48263639 Sorghum bicolor
Sobic.009G129100 2.0kb downstream 2.0kb downstream 10702 true Chr09: 48250938-48261639 Sorghum bicolor
Sobic.009G129100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48250938-48252937 Sorghum bicolor
Sobic.009G129100 5.0kb upstream 5.0kb upstream 13702 true Chr09: 48252938-48266639 Sorghum bicolor
Sobic.009G129100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48261640-48266639 Sorghum bicolor
Sobic.009G129100 5.0kb downstream 5.0kb downstream 13702 true Chr09: 48247938-48261639 Sorghum bicolor
Sobic.009G129100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48247938-48252937 Sorghum bicolor
Sobic.009G129100 10.0kb upstream 10.0kb upstream 18702 true Chr09: 48252938-48271639 Sorghum bicolor
Sobic.009G129100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48261640-48271639 Sorghum bicolor
Sobic.009G129100 10.0kb downstream 10.0kb downstream 18702 true Chr09: 48242938-48261639 Sorghum bicolor
Sobic.009G129100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48242938-48252937 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185970 5267 Panicoideae View MSA
124577798 5269 Grass View MSA
122042778 5273 Angiosperm View MSA
121345832 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.158        
cufflinks 1.17        
cufflinks 1.931       High
cufflinks 1.473        
cufflinks 1.347        
cufflinks 2.208       High
cufflinks 1.139        
cufflinks 1.168        
cufflinks 1.851       High
cufflinks 1.654        
cufflinks 0.915       Low
cufflinks 1.087        
cufflinks 1.629        
cufflinks 0.792       Low
cufflinks 1.602        
cufflinks 1.378        
cufflinks 1.133        
cufflinks 1.178        
cufflinks 0.823       Low
cufflinks 1.223        
cufflinks 2.091       High
cufflinks 1.015        
cufflinks 0.863       Low
cufflinks 0.882       Low
cufflinks 1.536        
cufflinks 1.066        
cufflinks 1.111        
cufflinks 1.372        
cufflinks 1.634        
cufflinks 1.505        

0 Strain