Gene : Sobic.009G130400 S. bicolor v3.1.1
Defline:  (1 of 2) K03015 - DNA-directed RNA polymerase II subunit RPB7 (RPB7, POLR2G) Genomic Order:  1342
Name:  ? Sobic.009G130400 Secondary Identifier:  ? PAC:37920543
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G130400 0.5kb upstream 0.5kb upstream 3105 true Chr09: 48376233-48379337 Sorghum bicolor
Sobic.009G130400 0.5kb upstream 0.5kb upstream 500 false Chr09: 48378838-48379337 Sorghum bicolor
Sobic.009G130400 0.5kb downstream 0.5kb downstream 3105 true Chr09: 48375733-48378837 Sorghum bicolor
Sobic.009G130400 0.5kb downstream 0.5kb downstream 500 false Chr09: 48375733-48376232 Sorghum bicolor
Sobic.009G130400 1.0kb upstream 1.0kb upstream 3605 true Chr09: 48376233-48379837 Sorghum bicolor
Sobic.009G130400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48378838-48379837 Sorghum bicolor
Sobic.009G130400 1.0kb downstream 1.0kb downstream 3605 true Chr09: 48375233-48378837 Sorghum bicolor
Sobic.009G130400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48375233-48376232 Sorghum bicolor
Sobic.009G130400 2.0kb upstream 2.0kb upstream 4605 true Chr09: 48376233-48380837 Sorghum bicolor
Sobic.009G130400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48378838-48380837 Sorghum bicolor
Sobic.009G130400 2.0kb downstream 2.0kb downstream 4605 true Chr09: 48374233-48378837 Sorghum bicolor
Sobic.009G130400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48374233-48376232 Sorghum bicolor
Sobic.009G130400 5.0kb upstream 5.0kb upstream 7605 true Chr09: 48376233-48383837 Sorghum bicolor
Sobic.009G130400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48378838-48383837 Sorghum bicolor
Sobic.009G130400 5.0kb downstream 5.0kb downstream 7605 true Chr09: 48371233-48378837 Sorghum bicolor
Sobic.009G130400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48371233-48376232 Sorghum bicolor
Sobic.009G130400 10.0kb upstream 10.0kb upstream 12605 true Chr09: 48376233-48388837 Sorghum bicolor
Sobic.009G130400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48378838-48388837 Sorghum bicolor
Sobic.009G130400 10.0kb downstream 10.0kb downstream 12605 true Chr09: 48366233-48378837 Sorghum bicolor
Sobic.009G130400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48366233-48376232 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192465 5267 Panicoideae View MSA
124570510 5269 Grass View MSA
122045109 5273 Angiosperm View MSA
121343808 5274 Embryophyte View MSA
123424516 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.982     High High
cufflinks 2.509       Low
cufflinks 5.426        
cufflinks 7.85       High
cufflinks 3.687        
cufflinks 4.853        
cufflinks 3.726        
cufflinks 2.257       Low
cufflinks 5.68        
cufflinks 6.884        
cufflinks 4.743        
cufflinks 4.718        
cufflinks 6.685        
cufflinks 4.87        
cufflinks 9.051       High
cufflinks 5.545        
cufflinks 4.461        
cufflinks 4.405        
cufflinks 2.425       Low
cufflinks 5.896        
cufflinks 7.131       High
cufflinks 4.923        
cufflinks 4.182        
cufflinks 5.313        
cufflinks 2.742       Low
cufflinks 2.221       Low
cufflinks 5.292        
cufflinks 5.567        
cufflinks 2.264       Low
cufflinks 11.209       High

0 Strain