Gene : Sobic.009G131300 S. bicolor v3.1.1
Defline:  (1 of 1) K14950 - cation-transporting ATPase 13A1 (ATP13A1) Genomic Order:  1352
Name:  ? Sobic.009G131300 Secondary Identifier:  ? PAC:37918988
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G131300 0.5kb upstream 0.5kb upstream 17033 true Chr09: 48477458-48494490 Sorghum bicolor
Sobic.009G131300 0.5kb upstream 0.5kb upstream 500 false Chr09: 48493991-48494490 Sorghum bicolor
Sobic.009G131300 0.5kb downstream 0.5kb downstream 17033 true Chr09: 48476958-48493990 Sorghum bicolor
Sobic.009G131300 0.5kb downstream 0.5kb downstream 500 false Chr09: 48476958-48477457 Sorghum bicolor
Sobic.009G131300 1.0kb upstream 1.0kb upstream 17533 true Chr09: 48477458-48494990 Sorghum bicolor
Sobic.009G131300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48493991-48494990 Sorghum bicolor
Sobic.009G131300 1.0kb downstream 1.0kb downstream 17533 true Chr09: 48476458-48493990 Sorghum bicolor
Sobic.009G131300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48476458-48477457 Sorghum bicolor
Sobic.009G131300 2.0kb upstream 2.0kb upstream 18533 true Chr09: 48477458-48495990 Sorghum bicolor
Sobic.009G131300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48493991-48495990 Sorghum bicolor
Sobic.009G131300 2.0kb downstream 2.0kb downstream 18533 true Chr09: 48475458-48493990 Sorghum bicolor
Sobic.009G131300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48475458-48477457 Sorghum bicolor
Sobic.009G131300 5.0kb upstream 5.0kb upstream 21533 true Chr09: 48477458-48498990 Sorghum bicolor
Sobic.009G131300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48493991-48498990 Sorghum bicolor
Sobic.009G131300 5.0kb downstream 5.0kb downstream 21533 true Chr09: 48472458-48493990 Sorghum bicolor
Sobic.009G131300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48472458-48477457 Sorghum bicolor
Sobic.009G131300 10.0kb upstream 10.0kb upstream 26533 true Chr09: 48477458-48503990 Sorghum bicolor
Sobic.009G131300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48493991-48503990 Sorghum bicolor
Sobic.009G131300 10.0kb downstream 10.0kb downstream 26533 true Chr09: 48467458-48493990 Sorghum bicolor
Sobic.009G131300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48467458-48477457 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026494 5273 Angiosperm View MSA
122198119 5267 Panicoideae View MSA
124580561 5269 Grass View MSA
121344570 5274 Embryophyte View MSA
123424459 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.253        
cufflinks 1.739       Low
cufflinks 4.582        
cufflinks 6.49        
cufflinks 11.565        
cufflinks 4.327        
cufflinks 6.381        
cufflinks 2.67       Low
cufflinks 13.052     High High
cufflinks 12.189     High  
cufflinks 10.661        
cufflinks 11.949     High  
cufflinks 9.83        
cufflinks 10.295        
cufflinks 8.33        
cufflinks 2.922       Low
cufflinks 6.382        
cufflinks 6.778        
cufflinks 3.789       Low
cufflinks 7.188        
cufflinks 10.098        
cufflinks 10.97        
cufflinks 12.113     High  
cufflinks 12.131     High  
cufflinks 4.204        
cufflinks 2.051       Low
cufflinks 9.584        
cufflinks 3.588       Low
cufflinks 5.288        
cufflinks 10.705        

0 Strain