Gene : Sobic.009G132900 S. bicolor v3.1.1
Defline:  (1 of 2) 2.7.9.1 - Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase Genomic Order:  1367
Name:  ? Sobic.009G132900 Secondary Identifier:  ? PAC:37919464
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-241 Sorghum bicolor pathologic  
Sbicolor PWY-6549 Sorghum bicolor pathologic  
Sbicolor PWY-7115 Sorghum bicolor pathologic  
Sbicolor PWY-7117 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G132900 0.5kb upstream 0.5kb upstream 13376 true Chr09: 48725978-48739353 Sorghum bicolor
Sobic.009G132900 0.5kb upstream 0.5kb upstream 500 false Chr09: 48738854-48739353 Sorghum bicolor
Sobic.009G132900 0.5kb downstream 0.5kb downstream 13376 true Chr09: 48725478-48738853 Sorghum bicolor
Sobic.009G132900 0.5kb downstream 0.5kb downstream 500 false Chr09: 48725478-48725977 Sorghum bicolor
Sobic.009G132900 1.0kb upstream 1.0kb upstream 13876 true Chr09: 48725978-48739853 Sorghum bicolor
Sobic.009G132900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48738854-48739853 Sorghum bicolor
Sobic.009G132900 1.0kb downstream 1.0kb downstream 13876 true Chr09: 48724978-48738853 Sorghum bicolor
Sobic.009G132900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48724978-48725977 Sorghum bicolor
Sobic.009G132900 2.0kb upstream 2.0kb upstream 14876 true Chr09: 48725978-48740853 Sorghum bicolor
Sobic.009G132900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48738854-48740853 Sorghum bicolor
Sobic.009G132900 2.0kb downstream 2.0kb downstream 14876 true Chr09: 48723978-48738853 Sorghum bicolor
Sobic.009G132900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48723978-48725977 Sorghum bicolor
Sobic.009G132900 5.0kb upstream 5.0kb upstream 17876 true Chr09: 48725978-48743853 Sorghum bicolor
Sobic.009G132900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48738854-48743853 Sorghum bicolor
Sobic.009G132900 5.0kb downstream 5.0kb downstream 17876 true Chr09: 48720978-48738853 Sorghum bicolor
Sobic.009G132900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48720978-48725977 Sorghum bicolor
Sobic.009G132900 10.0kb upstream 10.0kb upstream 22876 true Chr09: 48725978-48748853 Sorghum bicolor
Sobic.009G132900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48738854-48748853 Sorghum bicolor
Sobic.009G132900 10.0kb downstream 10.0kb downstream 22876 true Chr09: 48715978-48738853 Sorghum bicolor
Sobic.009G132900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48715978-48725977 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191982 5267 Panicoideae View MSA
124580317 5269 Grass View MSA
122045986 5273 Angiosperm View MSA
121345134 5274 Embryophyte View MSA
123425418 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.141        
cufflinks 1725.635     High High
cufflinks 688.425     High High
cufflinks 176.366     High  
cufflinks 3.456        
cufflinks 79.325     High  
cufflinks 508.626     High High
cufflinks 780.901     High High
cufflinks 14.849     High  
cufflinks 25.253     High  
cufflinks 0.617       Low
cufflinks 1.075       Low
cufflinks 0.871       Low
cufflinks 4.138        
cufflinks 71.695     High  
cufflinks 1210.475     High High
cufflinks 482.21     High High
cufflinks 496.101     High High
cufflinks 740.73     High High
cufflinks 396.67     High High
cufflinks 0.185       Low
cufflinks 3.252        
cufflinks 1.243        
cufflinks 2.02        
cufflinks 1445.78     High High
cufflinks 1617.383     High High
cufflinks 1.179        
cufflinks 0.211       Low
cufflinks 196.003     High  
cufflinks 39.181     High  

0 Strain