Gene : Sobic.009G133700 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  1375
Name:  ? Sobic.009G133700 Secondary Identifier:  ? PAC:37922366
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G133700 0.5kb upstream 0.5kb upstream 4021 true Chr09: 48802547-48806567 Sorghum bicolor
Sobic.009G133700 0.5kb upstream 0.5kb upstream 500 false Chr09: 48802547-48803046 Sorghum bicolor
Sobic.009G133700 0.5kb downstream 0.5kb downstream 4021 true Chr09: 48803047-48807067 Sorghum bicolor
Sobic.009G133700 0.5kb downstream 0.5kb downstream 500 false Chr09: 48806568-48807067 Sorghum bicolor
Sobic.009G133700 1.0kb upstream 1.0kb upstream 4521 true Chr09: 48802047-48806567 Sorghum bicolor
Sobic.009G133700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48802047-48803046 Sorghum bicolor
Sobic.009G133700 1.0kb downstream 1.0kb downstream 4521 true Chr09: 48803047-48807567 Sorghum bicolor
Sobic.009G133700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48806568-48807567 Sorghum bicolor
Sobic.009G133700 2.0kb upstream 2.0kb upstream 5521 true Chr09: 48801047-48806567 Sorghum bicolor
Sobic.009G133700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48801047-48803046 Sorghum bicolor
Sobic.009G133700 2.0kb downstream 2.0kb downstream 5521 true Chr09: 48803047-48808567 Sorghum bicolor
Sobic.009G133700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48806568-48808567 Sorghum bicolor
Sobic.009G133700 5.0kb upstream 5.0kb upstream 8521 true Chr09: 48798047-48806567 Sorghum bicolor
Sobic.009G133700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48798047-48803046 Sorghum bicolor
Sobic.009G133700 5.0kb downstream 5.0kb downstream 8521 true Chr09: 48803047-48811567 Sorghum bicolor
Sobic.009G133700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48806568-48811567 Sorghum bicolor
Sobic.009G133700 10.0kb upstream 10.0kb upstream 13521 true Chr09: 48793047-48806567 Sorghum bicolor
Sobic.009G133700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48793047-48803046 Sorghum bicolor
Sobic.009G133700 10.0kb downstream 10.0kb downstream 13521 true Chr09: 48803047-48816567 Sorghum bicolor
Sobic.009G133700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48806568-48816567 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026247 5273 Angiosperm View MSA
122184604 5267 Panicoideae View MSA
124569480 5269 Grass View MSA
121349608 5274 Embryophyte View MSA
123425538 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117       Low
cufflinks 105.637     High High
cufflinks 71.154     High High
cufflinks 14.066     High  
cufflinks 0.906        
cufflinks 19.703     High  
cufflinks 51.847     High High
cufflinks 49.108     High High
cufflinks 1.129        
cufflinks 1.22        
cufflinks 0.116       Low
cufflinks 0.297        
cufflinks 2.049        
cufflinks 0.091     Low Low
cufflinks 8.847        
cufflinks 76.156     High High
cufflinks 46.734     High High
cufflinks 56.765     High High
cufflinks 34.699     High High
cufflinks 31.889     High High
cufflinks 0.813        
cufflinks 0.098     Low Low
cufflinks 0.15       Low
cufflinks 0.244        
cufflinks 57.487     High High
cufflinks 81.595     High High
cufflinks 0.215       Low
cufflinks 0.392        
cufflinks 41.01     High High
cufflinks 4.559        

0 Strain