Gene : Sobic.004G231800 S. bicolor v3.1.1
Defline:  (1 of 1) K02904 - large subunit ribosomal protein L29 (RP-L29, rpmC) Genomic Order:  2419
Name:  ? Sobic.004G231800 Secondary Identifier:  ? PAC:37929818
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G231800 0.5kb upstream 0.5kb upstream 2117 true Chr04: 58105505-58107621 Sorghum bicolor
Sobic.004G231800 0.5kb upstream 0.5kb upstream 500 false Chr04: 58107122-58107621 Sorghum bicolor
Sobic.004G231800 0.5kb downstream 0.5kb downstream 2117 true Chr04: 58105005-58107121 Sorghum bicolor
Sobic.004G231800 0.5kb downstream 0.5kb downstream 500 false Chr04: 58105005-58105504 Sorghum bicolor
Sobic.004G231800 1.0kb upstream 1.0kb upstream 2617 true Chr04: 58105505-58108121 Sorghum bicolor
Sobic.004G231800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 58107122-58108121 Sorghum bicolor
Sobic.004G231800 1.0kb downstream 1.0kb downstream 2617 true Chr04: 58104505-58107121 Sorghum bicolor
Sobic.004G231800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 58104505-58105504 Sorghum bicolor
Sobic.004G231800 2.0kb upstream 2.0kb upstream 3617 true Chr04: 58105505-58109121 Sorghum bicolor
Sobic.004G231800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 58107122-58109121 Sorghum bicolor
Sobic.004G231800 2.0kb downstream 2.0kb downstream 3617 true Chr04: 58103505-58107121 Sorghum bicolor
Sobic.004G231800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 58103505-58105504 Sorghum bicolor
Sobic.004G231800 5.0kb upstream 5.0kb upstream 6617 true Chr04: 58105505-58112121 Sorghum bicolor
Sobic.004G231800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 58107122-58112121 Sorghum bicolor
Sobic.004G231800 5.0kb downstream 5.0kb downstream 6617 true Chr04: 58100505-58107121 Sorghum bicolor
Sobic.004G231800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 58100505-58105504 Sorghum bicolor
Sobic.004G231800 10.0kb upstream 10.0kb upstream 11617 true Chr04: 58105505-58117121 Sorghum bicolor
Sobic.004G231800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 58107122-58117121 Sorghum bicolor
Sobic.004G231800 10.0kb downstream 10.0kb downstream 11617 true Chr04: 58095505-58107121 Sorghum bicolor
Sobic.004G231800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 58095505-58105504 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186376 5267 Panicoideae View MSA
124574500 5269 Grass View MSA
122048296 5273 Angiosperm View MSA
121344034 5274 Embryophyte View MSA
123424171 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.437        
cufflinks 24.182     High  
cufflinks 19.465     High  
cufflinks 6.912        
cufflinks 5.888        
cufflinks 7.178        
cufflinks 56.4     High High
cufflinks 72.66     High High
cufflinks 1.476        
cufflinks 1.661        
cufflinks 0.958       Low
cufflinks 0.544       Low
cufflinks 1.15        
cufflinks 0.899       Low
cufflinks 4.78        
cufflinks 17.007     High  
cufflinks 66.352     High High
cufflinks 80.478     High High
cufflinks 14.065     High  
cufflinks 21.674     High  
cufflinks 3.89        
cufflinks 1.547        
cufflinks 0.964       Low
cufflinks 1.158        
cufflinks 5.317        
cufflinks 14.995     High  
cufflinks 1.13        
cufflinks 0.125       Low
cufflinks 131.094     High High
cufflinks 7.545        

0 Strain