Gene : Sobic.004G225600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF303 - RNA HELICASE // DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL Genomic Order:  2354
Name:  ? Sobic.004G225600 Secondary Identifier:  ? PAC:37930433
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G225600 0.5kb upstream 0.5kb upstream 3614 true Chr04: 57570426-57574039 Sorghum bicolor
Sobic.004G225600 0.5kb upstream 0.5kb upstream 500 false Chr04: 57573540-57574039 Sorghum bicolor
Sobic.004G225600 0.5kb downstream 0.5kb downstream 3614 true Chr04: 57569926-57573539 Sorghum bicolor
Sobic.004G225600 0.5kb downstream 0.5kb downstream 500 false Chr04: 57569926-57570425 Sorghum bicolor
Sobic.004G225600 1.0kb upstream 1.0kb upstream 4114 true Chr04: 57570426-57574539 Sorghum bicolor
Sobic.004G225600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 57573540-57574539 Sorghum bicolor
Sobic.004G225600 1.0kb downstream 1.0kb downstream 4114 true Chr04: 57569426-57573539 Sorghum bicolor
Sobic.004G225600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 57569426-57570425 Sorghum bicolor
Sobic.004G225600 2.0kb upstream 2.0kb upstream 5114 true Chr04: 57570426-57575539 Sorghum bicolor
Sobic.004G225600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 57573540-57575539 Sorghum bicolor
Sobic.004G225600 2.0kb downstream 2.0kb downstream 5114 true Chr04: 57568426-57573539 Sorghum bicolor
Sobic.004G225600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 57568426-57570425 Sorghum bicolor
Sobic.004G225600 5.0kb upstream 5.0kb upstream 8114 true Chr04: 57570426-57578539 Sorghum bicolor
Sobic.004G225600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 57573540-57578539 Sorghum bicolor
Sobic.004G225600 5.0kb downstream 5.0kb downstream 8114 true Chr04: 57565426-57573539 Sorghum bicolor
Sobic.004G225600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 57565426-57570425 Sorghum bicolor
Sobic.004G225600 10.0kb upstream 10.0kb upstream 13114 true Chr04: 57570426-57583539 Sorghum bicolor
Sobic.004G225600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 57573540-57583539 Sorghum bicolor
Sobic.004G225600 10.0kb downstream 10.0kb downstream 13114 true Chr04: 57560426-57573539 Sorghum bicolor
Sobic.004G225600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 57560426-57570425 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185677 5267 Panicoideae View MSA
124577552 5269 Grass View MSA
122045759 5273 Angiosperm View MSA
121346907 5274 Embryophyte View MSA
123426302 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.681        
cufflinks 3.514       Low
cufflinks 5.835        
cufflinks 5.796        
cufflinks 6.188        
cufflinks 6.994        
cufflinks 10.33       High
cufflinks 8.869     High  
cufflinks 7.811        
cufflinks 7.187        
cufflinks 3.63       Low
cufflinks 5.077        
cufflinks 6.219        
cufflinks 5.029        
cufflinks 5.628        
cufflinks 5.132        
cufflinks 10.381       High
cufflinks 12.215     High High
cufflinks 7.082        
cufflinks 7.994        
cufflinks 9.679       High
cufflinks 4.061        
cufflinks 5.407        
cufflinks 5.444        
cufflinks 3.412       Low
cufflinks 3.191       Low
cufflinks 4.058        
cufflinks 5.244        
cufflinks 22.968     High High
cufflinks 6.27        

0 Strain