Gene : Sobic.009G154800 S. bicolor v3.1.1
Defline:  (1 of 5) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  1587
Name:  ? Sobic.009G154800 Secondary Identifier:  ? PAC:37922692
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G154800 0.5kb upstream 0.5kb upstream 5501 true Chr09: 51145487-51150987 Sorghum bicolor
Sobic.009G154800 0.5kb upstream 0.5kb upstream 500 false Chr09: 51150488-51150987 Sorghum bicolor
Sobic.009G154800 0.5kb downstream 0.5kb downstream 5501 true Chr09: 51144987-51150487 Sorghum bicolor
Sobic.009G154800 0.5kb downstream 0.5kb downstream 500 false Chr09: 51144987-51145486 Sorghum bicolor
Sobic.009G154800 1.0kb upstream 1.0kb upstream 6001 true Chr09: 51145487-51151487 Sorghum bicolor
Sobic.009G154800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 51150488-51151487 Sorghum bicolor
Sobic.009G154800 1.0kb downstream 1.0kb downstream 6001 true Chr09: 51144487-51150487 Sorghum bicolor
Sobic.009G154800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 51144487-51145486 Sorghum bicolor
Sobic.009G154800 2.0kb upstream 2.0kb upstream 7001 true Chr09: 51145487-51152487 Sorghum bicolor
Sobic.009G154800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 51150488-51152487 Sorghum bicolor
Sobic.009G154800 2.0kb downstream 2.0kb downstream 7001 true Chr09: 51143487-51150487 Sorghum bicolor
Sobic.009G154800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 51143487-51145486 Sorghum bicolor
Sobic.009G154800 5.0kb upstream 5.0kb upstream 10001 true Chr09: 51145487-51155487 Sorghum bicolor
Sobic.009G154800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 51150488-51155487 Sorghum bicolor
Sobic.009G154800 5.0kb downstream 5.0kb downstream 10001 true Chr09: 51140487-51150487 Sorghum bicolor
Sobic.009G154800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 51140487-51145486 Sorghum bicolor
Sobic.009G154800 10.0kb upstream 10.0kb upstream 15001 true Chr09: 51145487-51160487 Sorghum bicolor
Sobic.009G154800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 51150488-51160487 Sorghum bicolor
Sobic.009G154800 10.0kb downstream 10.0kb downstream 15001 true Chr09: 51135487-51150487 Sorghum bicolor
Sobic.009G154800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 51135487-51145486 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176958 5267 Panicoideae View MSA
124571350 5269 Grass View MSA
122049010 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.542       Low
cufflinks 3.317        
cufflinks 4.073        
cufflinks 2.04       Low
cufflinks 4.84        
cufflinks 3.027        
cufflinks 5.442        
cufflinks 3.26        
cufflinks 4.625        
cufflinks 4.596        
cufflinks 5.137        
cufflinks 5.241        
cufflinks 6.331       High
cufflinks 4.201        
cufflinks 4.76        
cufflinks 3.926        
cufflinks 5.184        
cufflinks 5.336        
cufflinks 3.746        
cufflinks 6.265        
cufflinks 3.62        
cufflinks 4.982        
cufflinks 4.569        
cufflinks 4.446        
cufflinks 3.45        
cufflinks 2.415       Low
cufflinks 3.903        
cufflinks 0.841       Low
cufflinks 4.296        
cufflinks 4.519        

0 Strain