Gene : Sobic.004G216400 S. bicolor v3.1.1
Defline:  (1 of 3) K14319 - Ran GTPase-activating protein 1 (RANGAP1) Genomic Order:  2254
Name:  ? Sobic.004G216400 Secondary Identifier:  ? PAC:37934044
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G216400 0.5kb upstream 0.5kb upstream 4960 true Chr04: 56604971-56609930 Sorghum bicolor
Sobic.004G216400 0.5kb upstream 0.5kb upstream 500 false Chr04: 56604971-56605470 Sorghum bicolor
Sobic.004G216400 0.5kb downstream 0.5kb downstream 4960 true Chr04: 56605471-56610430 Sorghum bicolor
Sobic.004G216400 0.5kb downstream 0.5kb downstream 500 false Chr04: 56609931-56610430 Sorghum bicolor
Sobic.004G216400 1.0kb upstream 1.0kb upstream 5460 true Chr04: 56604471-56609930 Sorghum bicolor
Sobic.004G216400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 56604471-56605470 Sorghum bicolor
Sobic.004G216400 1.0kb downstream 1.0kb downstream 5460 true Chr04: 56605471-56610930 Sorghum bicolor
Sobic.004G216400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 56609931-56610930 Sorghum bicolor
Sobic.004G216400 2.0kb upstream 2.0kb upstream 6460 true Chr04: 56603471-56609930 Sorghum bicolor
Sobic.004G216400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 56603471-56605470 Sorghum bicolor
Sobic.004G216400 2.0kb downstream 2.0kb downstream 6460 true Chr04: 56605471-56611930 Sorghum bicolor
Sobic.004G216400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 56609931-56611930 Sorghum bicolor
Sobic.004G216400 5.0kb upstream 5.0kb upstream 9460 true Chr04: 56600471-56609930 Sorghum bicolor
Sobic.004G216400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 56600471-56605470 Sorghum bicolor
Sobic.004G216400 5.0kb downstream 5.0kb downstream 9460 true Chr04: 56605471-56614930 Sorghum bicolor
Sobic.004G216400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 56609931-56614930 Sorghum bicolor
Sobic.004G216400 10.0kb upstream 10.0kb upstream 14460 true Chr04: 56595471-56609930 Sorghum bicolor
Sobic.004G216400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 56595471-56605470 Sorghum bicolor
Sobic.004G216400 10.0kb downstream 10.0kb downstream 14460 true Chr04: 56605471-56619930 Sorghum bicolor
Sobic.004G216400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 56609931-56619930 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196274 5267 Panicoideae View MSA
124575971 5269 Grass View MSA
122044051 5273 Angiosperm View MSA
121346324 5274 Embryophyte View MSA
123428051 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.541     High High
cufflinks 2.332       Low
cufflinks 5.638        
cufflinks 10.601        
cufflinks 12.161        
cufflinks 7.123        
cufflinks 10.474        
cufflinks 2.345       Low
cufflinks 11.273        
cufflinks 12.351     High  
cufflinks 14.731     High  
cufflinks 13.286     High  
cufflinks 8.594        
cufflinks 13.196     High  
cufflinks 8.802        
cufflinks 5.076        
cufflinks 10.92        
cufflinks 11.776     High  
cufflinks 5.627        
cufflinks 10.719        
cufflinks 23.7     High High
cufflinks 15.994     High  
cufflinks 17.311     High  
cufflinks 18.66     High  
cufflinks 3.863       Low
cufflinks 1.727       Low
cufflinks 9.538        
cufflinks 8.388        
cufflinks 5.099        
cufflinks 13.334     High  

0 Strain