Gene : Sobic.009G156000 S. bicolor v3.1.1
Defline:  (1 of 1) K00685 - arginine-tRNA-protein transferase [EC:2.3.2.8] (ATE1, ate1) Genomic Order:  1600
Name:  ? Sobic.009G156000 Secondary Identifier:  ? PAC:37922398
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G156000 0.5kb upstream 0.5kb upstream 7449 true Chr09: 51378227-51385675 Sorghum bicolor
Sobic.009G156000 0.5kb upstream 0.5kb upstream 500 false Chr09: 51385176-51385675 Sorghum bicolor
Sobic.009G156000 0.5kb downstream 0.5kb downstream 7449 true Chr09: 51377727-51385175 Sorghum bicolor
Sobic.009G156000 0.5kb downstream 0.5kb downstream 500 false Chr09: 51377727-51378226 Sorghum bicolor
Sobic.009G156000 1.0kb upstream 1.0kb upstream 7949 true Chr09: 51378227-51386175 Sorghum bicolor
Sobic.009G156000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 51385176-51386175 Sorghum bicolor
Sobic.009G156000 1.0kb downstream 1.0kb downstream 7949 true Chr09: 51377227-51385175 Sorghum bicolor
Sobic.009G156000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 51377227-51378226 Sorghum bicolor
Sobic.009G156000 2.0kb upstream 2.0kb upstream 8949 true Chr09: 51378227-51387175 Sorghum bicolor
Sobic.009G156000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 51385176-51387175 Sorghum bicolor
Sobic.009G156000 2.0kb downstream 2.0kb downstream 8949 true Chr09: 51376227-51385175 Sorghum bicolor
Sobic.009G156000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 51376227-51378226 Sorghum bicolor
Sobic.009G156000 5.0kb upstream 5.0kb upstream 11949 true Chr09: 51378227-51390175 Sorghum bicolor
Sobic.009G156000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 51385176-51390175 Sorghum bicolor
Sobic.009G156000 5.0kb downstream 5.0kb downstream 11949 true Chr09: 51373227-51385175 Sorghum bicolor
Sobic.009G156000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 51373227-51378226 Sorghum bicolor
Sobic.009G156000 10.0kb upstream 10.0kb upstream 16949 true Chr09: 51378227-51395175 Sorghum bicolor
Sobic.009G156000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 51385176-51395175 Sorghum bicolor
Sobic.009G156000 10.0kb downstream 10.0kb downstream 16949 true Chr09: 51368227-51385175 Sorghum bicolor
Sobic.009G156000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 51368227-51378226 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181222 5267 Panicoideae View MSA
124578045 5269 Grass View MSA
122043571 5273 Angiosperm View MSA
121344569 5274 Embryophyte View MSA
123426558 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.416        
cufflinks 0.283        
cufflinks 0.353        
cufflinks 0.403        
cufflinks 0.356        
cufflinks 0.276        
cufflinks 0.273        
cufflinks 0.264       Low
cufflinks 0.628       High
cufflinks 0.531        
cufflinks 0.462        
cufflinks 0.678       High
cufflinks 0.517        
cufflinks 0.548        
cufflinks 0.413        
cufflinks 0.38        
cufflinks 0.256       Low
cufflinks 0.304        
cufflinks 0.36        
cufflinks 0.36        
cufflinks 0.686       High
cufflinks 0.541        
cufflinks 0.538        
cufflinks 0.453        
cufflinks 0.605       High
cufflinks 0.275        
cufflinks 0.62       High
cufflinks 0.413        
cufflinks 0.253       Low
cufflinks 0.409        

0 Strain