Gene : Sobic.009G156600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22950//PTHR22950:SF256 - AMINO ACID TRANSPORTER // AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  1606
Name:  ? Sobic.009G156600 Secondary Identifier:  ? PAC:37921766
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G156600 0.5kb upstream 0.5kb upstream 5206 true Chr09: 51414093-51419298 Sorghum bicolor
Sobic.009G156600 0.5kb upstream 0.5kb upstream 500 false Chr09: 51418799-51419298 Sorghum bicolor
Sobic.009G156600 0.5kb downstream 0.5kb downstream 5206 true Chr09: 51413593-51418798 Sorghum bicolor
Sobic.009G156600 0.5kb downstream 0.5kb downstream 500 false Chr09: 51413593-51414092 Sorghum bicolor
Sobic.009G156600 1.0kb upstream 1.0kb upstream 5706 true Chr09: 51414093-51419798 Sorghum bicolor
Sobic.009G156600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 51418799-51419798 Sorghum bicolor
Sobic.009G156600 1.0kb downstream 1.0kb downstream 5706 true Chr09: 51413093-51418798 Sorghum bicolor
Sobic.009G156600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 51413093-51414092 Sorghum bicolor
Sobic.009G156600 2.0kb upstream 2.0kb upstream 6706 true Chr09: 51414093-51420798 Sorghum bicolor
Sobic.009G156600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 51418799-51420798 Sorghum bicolor
Sobic.009G156600 2.0kb downstream 2.0kb downstream 6706 true Chr09: 51412093-51418798 Sorghum bicolor
Sobic.009G156600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 51412093-51414092 Sorghum bicolor
Sobic.009G156600 5.0kb upstream 5.0kb upstream 9706 true Chr09: 51414093-51423798 Sorghum bicolor
Sobic.009G156600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 51418799-51423798 Sorghum bicolor
Sobic.009G156600 5.0kb downstream 5.0kb downstream 9706 true Chr09: 51409093-51418798 Sorghum bicolor
Sobic.009G156600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 51409093-51414092 Sorghum bicolor
Sobic.009G156600 10.0kb upstream 10.0kb upstream 14706 true Chr09: 51414093-51428798 Sorghum bicolor
Sobic.009G156600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 51418799-51428798 Sorghum bicolor
Sobic.009G156600 10.0kb downstream 10.0kb downstream 14706 true Chr09: 51404093-51418798 Sorghum bicolor
Sobic.009G156600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 51404093-51414092 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178114 5267 Panicoideae View MSA
124584451 5269 Grass View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.994        
cufflinks 0.306       Low
cufflinks 0.955        
cufflinks 2.506        
cufflinks 3.165        
cufflinks 6.513       High
cufflinks 1.12        
cufflinks 1.88        
cufflinks 15.636     High High
cufflinks 9.672       High
cufflinks 1.012        
cufflinks 1.169        
cufflinks 18.01     High High
cufflinks 1.247        
cufflinks 1.556        
cufflinks 0.538        
cufflinks 0.896        
cufflinks 0.655        
cufflinks 3.478        
cufflinks 1.162        
cufflinks 0.637        
cufflinks 1.236        
cufflinks 0.816        
cufflinks 0.88        
cufflinks 0.271       Low
cufflinks 0.31       Low
cufflinks 0.712        
cufflinks 0.005     Low Low
cufflinks 1.561        
cufflinks 1.516        

0 Strain