Gene : Sobic.004G213300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12294 - EF HAND DOMAIN FAMILY A1,A2-RELATED Genomic Order:  2224
Name:  ? Sobic.004G213300 Secondary Identifier:  ? PAC:37930123
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G213300 0.5kb upstream 0.5kb upstream 5457 true Chr04: 56313632-56319088 Sorghum bicolor
Sobic.004G213300 0.5kb upstream 0.5kb upstream 500 false Chr04: 56313632-56314131 Sorghum bicolor
Sobic.004G213300 0.5kb downstream 0.5kb downstream 5457 true Chr04: 56314132-56319588 Sorghum bicolor
Sobic.004G213300 0.5kb downstream 0.5kb downstream 500 false Chr04: 56319089-56319588 Sorghum bicolor
Sobic.004G213300 1.0kb upstream 1.0kb upstream 5957 true Chr04: 56313132-56319088 Sorghum bicolor
Sobic.004G213300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 56313132-56314131 Sorghum bicolor
Sobic.004G213300 1.0kb downstream 1.0kb downstream 5957 true Chr04: 56314132-56320088 Sorghum bicolor
Sobic.004G213300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 56319089-56320088 Sorghum bicolor
Sobic.004G213300 2.0kb upstream 2.0kb upstream 6957 true Chr04: 56312132-56319088 Sorghum bicolor
Sobic.004G213300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 56312132-56314131 Sorghum bicolor
Sobic.004G213300 2.0kb downstream 2.0kb downstream 6957 true Chr04: 56314132-56321088 Sorghum bicolor
Sobic.004G213300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 56319089-56321088 Sorghum bicolor
Sobic.004G213300 5.0kb upstream 5.0kb upstream 9957 true Chr04: 56309132-56319088 Sorghum bicolor
Sobic.004G213300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 56309132-56314131 Sorghum bicolor
Sobic.004G213300 5.0kb downstream 5.0kb downstream 9957 true Chr04: 56314132-56324088 Sorghum bicolor
Sobic.004G213300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 56319089-56324088 Sorghum bicolor
Sobic.004G213300 10.0kb upstream 10.0kb upstream 14957 true Chr04: 56304132-56319088 Sorghum bicolor
Sobic.004G213300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 56304132-56314131 Sorghum bicolor
Sobic.004G213300 10.0kb downstream 10.0kb downstream 14957 true Chr04: 56314132-56329088 Sorghum bicolor
Sobic.004G213300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 56319089-56329088 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190840 5267 Panicoideae View MSA
124577420 5269 Grass View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.725       Low
cufflinks 15.87     High High
cufflinks 17.809     High High
cufflinks 7.156        
cufflinks 4.594        
cufflinks 18.993     High High
cufflinks 10.028        
cufflinks 10.377     High  
cufflinks 4.22        
cufflinks 4.601        
cufflinks 2.81       Low
cufflinks 2.712       Low
cufflinks 7.423        
cufflinks 2.779       Low
cufflinks 16.332     High High
cufflinks 10.106     High  
cufflinks 7.839        
cufflinks 10.677        
cufflinks 9.681        
cufflinks 6.892        
cufflinks 8.792        
cufflinks 3.406        
cufflinks 3.245        
cufflinks 3.133       Low
cufflinks 11.53     High High
cufflinks 14.55     High High
cufflinks 5.327        
cufflinks 3.404        
cufflinks 6.502        
cufflinks 8.951        

0 Strain