Gene : Sobic.009G156200 S. bicolor v3.1.1
Defline:  (1 of 1) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase Genomic Order:  1602
Name:  ? Sobic.009G156200 Secondary Identifier:  ? PAC:37920987
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G156200 0.5kb upstream 0.5kb upstream 5305 true Chr09: 51389665-51394969 Sorghum bicolor
Sobic.009G156200 0.5kb upstream 0.5kb upstream 500 false Chr09: 51394470-51394969 Sorghum bicolor
Sobic.009G156200 0.5kb downstream 0.5kb downstream 5305 true Chr09: 51389165-51394469 Sorghum bicolor
Sobic.009G156200 0.5kb downstream 0.5kb downstream 500 false Chr09: 51389165-51389664 Sorghum bicolor
Sobic.009G156200 1.0kb upstream 1.0kb upstream 5805 true Chr09: 51389665-51395469 Sorghum bicolor
Sobic.009G156200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 51394470-51395469 Sorghum bicolor
Sobic.009G156200 1.0kb downstream 1.0kb downstream 5805 true Chr09: 51388665-51394469 Sorghum bicolor
Sobic.009G156200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 51388665-51389664 Sorghum bicolor
Sobic.009G156200 2.0kb upstream 2.0kb upstream 6805 true Chr09: 51389665-51396469 Sorghum bicolor
Sobic.009G156200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 51394470-51396469 Sorghum bicolor
Sobic.009G156200 2.0kb downstream 2.0kb downstream 6805 true Chr09: 51387665-51394469 Sorghum bicolor
Sobic.009G156200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 51387665-51389664 Sorghum bicolor
Sobic.009G156200 5.0kb upstream 5.0kb upstream 9805 true Chr09: 51389665-51399469 Sorghum bicolor
Sobic.009G156200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 51394470-51399469 Sorghum bicolor
Sobic.009G156200 5.0kb downstream 5.0kb downstream 9805 true Chr09: 51384665-51394469 Sorghum bicolor
Sobic.009G156200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 51384665-51389664 Sorghum bicolor
Sobic.009G156200 10.0kb upstream 10.0kb upstream 14805 true Chr09: 51389665-51404469 Sorghum bicolor
Sobic.009G156200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 51394470-51404469 Sorghum bicolor
Sobic.009G156200 10.0kb downstream 10.0kb downstream 14805 true Chr09: 51379665-51394469 Sorghum bicolor
Sobic.009G156200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 51379665-51389664 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175085 5267 Panicoideae View MSA
124579732 5269 Grass View MSA
122047143 5273 Angiosperm View MSA
123429164 5275 Viridiplantae View MSA
121348122 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.295        
cufflinks 0.98        
cufflinks 1.634        
cufflinks 1.803        
cufflinks 16.283     High High
cufflinks 18.745     High High
cufflinks 8.561        
cufflinks 1.419        
cufflinks 7.346        
cufflinks 9.139        
cufflinks 0.21       Low
cufflinks 0.405       Low
cufflinks 11.49     High High
cufflinks 0.373       Low
cufflinks 8.722        
cufflinks 1.689        
cufflinks 8.253        
cufflinks 8.202        
cufflinks 3.374        
cufflinks 8.957        
cufflinks 19.969     High High
cufflinks 0.613       Low
cufflinks 0.379       Low
cufflinks 0.452       Low
cufflinks 0.827        
cufflinks 0.778        
cufflinks 0.731       Low
cufflinks 1.545        
cufflinks 3.167        
cufflinks 8.898        

0 Strain