Gene : Sobic.004G267600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR16517:SF41 - TUBBY-LIKE F-BOX PROTEIN 6 Genomic Order:  2798
Name:  ? Sobic.004G267600 Secondary Identifier:  ? PAC:37931976
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G267600 0.5kb upstream 0.5kb upstream 4176 true Chr04: 61181480-61185655 Sorghum bicolor
Sobic.004G267600 0.5kb upstream 0.5kb upstream 500 false Chr04: 61185156-61185655 Sorghum bicolor
Sobic.004G267600 0.5kb downstream 0.5kb downstream 4176 true Chr04: 61180980-61185155 Sorghum bicolor
Sobic.004G267600 0.5kb downstream 0.5kb downstream 500 false Chr04: 61180980-61181479 Sorghum bicolor
Sobic.004G267600 1.0kb upstream 1.0kb upstream 4676 true Chr04: 61181480-61186155 Sorghum bicolor
Sobic.004G267600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 61185156-61186155 Sorghum bicolor
Sobic.004G267600 1.0kb downstream 1.0kb downstream 4676 true Chr04: 61180480-61185155 Sorghum bicolor
Sobic.004G267600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 61180480-61181479 Sorghum bicolor
Sobic.004G267600 2.0kb upstream 2.0kb upstream 5676 true Chr04: 61181480-61187155 Sorghum bicolor
Sobic.004G267600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 61185156-61187155 Sorghum bicolor
Sobic.004G267600 2.0kb downstream 2.0kb downstream 5676 true Chr04: 61179480-61185155 Sorghum bicolor
Sobic.004G267600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 61179480-61181479 Sorghum bicolor
Sobic.004G267600 5.0kb upstream 5.0kb upstream 8676 true Chr04: 61181480-61190155 Sorghum bicolor
Sobic.004G267600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 61185156-61190155 Sorghum bicolor
Sobic.004G267600 5.0kb downstream 5.0kb downstream 8676 true Chr04: 61176480-61185155 Sorghum bicolor
Sobic.004G267600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 61176480-61181479 Sorghum bicolor
Sobic.004G267600 10.0kb upstream 10.0kb upstream 13676 true Chr04: 61181480-61195155 Sorghum bicolor
Sobic.004G267600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 61185156-61195155 Sorghum bicolor
Sobic.004G267600 10.0kb downstream 10.0kb downstream 13676 true Chr04: 61171480-61185155 Sorghum bicolor
Sobic.004G267600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 61171480-61181479 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179763 5267 Panicoideae View MSA
124586328 5269 Grass View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.067     High  
cufflinks 0.617       Low
cufflinks 1.397       Low
cufflinks 0.857       Low
cufflinks 38.354     High High
cufflinks 4.514        
cufflinks 19.56     High  
cufflinks 9.459     High  
cufflinks 7.065        
cufflinks 7.134        
cufflinks 14.903     High  
cufflinks 14.689     High  
cufflinks 10.992        
cufflinks 16.953     High  
cufflinks 16.859     High  
cufflinks 0.884       Low
cufflinks 18.33     High  
cufflinks 19.805     High  
cufflinks 1.704       Low
cufflinks 19.3     High  
cufflinks 57.567     High High
cufflinks 17.224     High  
cufflinks 16.019     High  
cufflinks 19.097     High  
cufflinks 0.63       Low
cufflinks 0.942       Low
cufflinks 5.783        
cufflinks 1.631       Low
cufflinks 13.446     High  
cufflinks 24.501     High  

0 Strain