Gene : Sobic.009G103600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  1067
Name:  ? Sobic.009G103600 Secondary Identifier:  ? PAC:37920016
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G103600 0.5kb upstream 0.5kb upstream 6661 true Chr09: 41574183-41580843 Sorghum bicolor
Sobic.009G103600 0.5kb upstream 0.5kb upstream 500 false Chr09: 41580344-41580843 Sorghum bicolor
Sobic.009G103600 0.5kb downstream 0.5kb downstream 6661 true Chr09: 41573683-41580343 Sorghum bicolor
Sobic.009G103600 0.5kb downstream 0.5kb downstream 500 false Chr09: 41573683-41574182 Sorghum bicolor
Sobic.009G103600 1.0kb upstream 1.0kb upstream 7161 true Chr09: 41574183-41581343 Sorghum bicolor
Sobic.009G103600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41580344-41581343 Sorghum bicolor
Sobic.009G103600 1.0kb downstream 1.0kb downstream 7161 true Chr09: 41573183-41580343 Sorghum bicolor
Sobic.009G103600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41573183-41574182 Sorghum bicolor
Sobic.009G103600 2.0kb upstream 2.0kb upstream 8161 true Chr09: 41574183-41582343 Sorghum bicolor
Sobic.009G103600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41580344-41582343 Sorghum bicolor
Sobic.009G103600 2.0kb downstream 2.0kb downstream 8161 true Chr09: 41572183-41580343 Sorghum bicolor
Sobic.009G103600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41572183-41574182 Sorghum bicolor
Sobic.009G103600 5.0kb upstream 5.0kb upstream 11161 true Chr09: 41574183-41585343 Sorghum bicolor
Sobic.009G103600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41580344-41585343 Sorghum bicolor
Sobic.009G103600 5.0kb downstream 5.0kb downstream 11161 true Chr09: 41569183-41580343 Sorghum bicolor
Sobic.009G103600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41569183-41574182 Sorghum bicolor
Sobic.009G103600 10.0kb upstream 10.0kb upstream 16161 true Chr09: 41574183-41590343 Sorghum bicolor
Sobic.009G103600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41580344-41590343 Sorghum bicolor
Sobic.009G103600 10.0kb downstream 10.0kb downstream 16161 true Chr09: 41564183-41580343 Sorghum bicolor
Sobic.009G103600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41564183-41574182 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196702 5267 Panicoideae View MSA
124588651 5269 Grass View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.438       High
cufflinks 0.178       Low
cufflinks 0.662        
cufflinks 0.84        
cufflinks 0.813        
cufflinks 1.062        
cufflinks 0.558        
cufflinks 0.357       Low
cufflinks 1.377       High
cufflinks 1.122        
cufflinks 0.634        
cufflinks 1.001        
cufflinks 0.87        
cufflinks 0.841        
cufflinks 0.691        
cufflinks 0.409       Low
cufflinks 0.518        
cufflinks 0.588        
cufflinks 0.461        
cufflinks 0.646        
cufflinks 1.132        
cufflinks 0.64        
cufflinks 0.749        
cufflinks 0.779        
cufflinks 0.526        
cufflinks 0.178       Low
cufflinks 0.991        
cufflinks 2.472       High
cufflinks 0.824        
cufflinks 0.802        

0 Strain