Gene : Sobic.009G108400 S. bicolor v3.1.1
Defline:  (1 of 1) K08658 - prenyl protein peptidase (RCE1, FACE2) Genomic Order:  1115
Name:  ? Sobic.009G108400 Secondary Identifier:  ? PAC:37921888
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G108400 0.5kb upstream 0.5kb upstream 4852 true Chr09: 43519371-43524222 Sorghum bicolor
Sobic.009G108400 0.5kb upstream 0.5kb upstream 500 false Chr09: 43519371-43519870 Sorghum bicolor
Sobic.009G108400 0.5kb downstream 0.5kb downstream 4852 true Chr09: 43519871-43524722 Sorghum bicolor
Sobic.009G108400 0.5kb downstream 0.5kb downstream 500 false Chr09: 43524223-43524722 Sorghum bicolor
Sobic.009G108400 1.0kb upstream 1.0kb upstream 5352 true Chr09: 43518871-43524222 Sorghum bicolor
Sobic.009G108400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 43518871-43519870 Sorghum bicolor
Sobic.009G108400 1.0kb downstream 1.0kb downstream 5352 true Chr09: 43519871-43525222 Sorghum bicolor
Sobic.009G108400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 43524223-43525222 Sorghum bicolor
Sobic.009G108400 2.0kb upstream 2.0kb upstream 6352 true Chr09: 43517871-43524222 Sorghum bicolor
Sobic.009G108400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 43517871-43519870 Sorghum bicolor
Sobic.009G108400 2.0kb downstream 2.0kb downstream 6352 true Chr09: 43519871-43526222 Sorghum bicolor
Sobic.009G108400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 43524223-43526222 Sorghum bicolor
Sobic.009G108400 5.0kb upstream 5.0kb upstream 9352 true Chr09: 43514871-43524222 Sorghum bicolor
Sobic.009G108400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 43514871-43519870 Sorghum bicolor
Sobic.009G108400 5.0kb downstream 5.0kb downstream 9352 true Chr09: 43519871-43529222 Sorghum bicolor
Sobic.009G108400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 43524223-43529222 Sorghum bicolor
Sobic.009G108400 10.0kb upstream 10.0kb upstream 14352 true Chr09: 43509871-43524222 Sorghum bicolor
Sobic.009G108400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 43509871-43519870 Sorghum bicolor
Sobic.009G108400 10.0kb downstream 10.0kb downstream 14352 true Chr09: 43519871-43534222 Sorghum bicolor
Sobic.009G108400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 43524223-43534222 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194851 5267 Panicoideae View MSA
124568271 5269 Grass View MSA
122044931 5273 Angiosperm View MSA
121347066 5274 Embryophyte View MSA
123424467 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.768       High
cufflinks 0.075       Low
cufflinks 0.158       Low
cufflinks 0.4        
cufflinks 0.757       High
cufflinks 0.738       High
cufflinks 0.412        
cufflinks 0.206       Low
cufflinks 0.488        
cufflinks 0.689        
cufflinks 0.423        
cufflinks 0.444        
cufflinks 0.597        
cufflinks 0.361        
cufflinks 0.55        
cufflinks 0.153       Low
cufflinks 0.417        
cufflinks 0.394        
cufflinks 0.2       Low
cufflinks 0.509        
cufflinks 0.709       High
cufflinks 0.649        
cufflinks 0.442        
cufflinks 0.465        
cufflinks 0.164       Low
cufflinks 0.089       Low
cufflinks 0.246        
cufflinks 0.139       Low
cufflinks 0.356        
cufflinks 0.612        

0 Strain