Gene : Sobic.004G258800 S. bicolor v3.1.1
Defline:  (1 of 2) PF00612//PF02179 - IQ calmodulin-binding motif (IQ) // BAG domain (BAG) Genomic Order:  2706
Name:  ? Sobic.004G258800 Secondary Identifier:  ? PAC:37932421
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G258800 0.5kb upstream 0.5kb upstream 1130 true Chr04: 60426532-60427661 Sorghum bicolor
Sobic.004G258800 0.5kb upstream 0.5kb upstream 500 false Chr04: 60427162-60427661 Sorghum bicolor
Sobic.004G258800 0.5kb downstream 0.5kb downstream 1130 true Chr04: 60426032-60427161 Sorghum bicolor
Sobic.004G258800 0.5kb downstream 0.5kb downstream 500 false Chr04: 60426032-60426531 Sorghum bicolor
Sobic.004G258800 1.0kb upstream 1.0kb upstream 1630 true Chr04: 60426532-60428161 Sorghum bicolor
Sobic.004G258800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 60427162-60428161 Sorghum bicolor
Sobic.004G258800 1.0kb downstream 1.0kb downstream 1630 true Chr04: 60425532-60427161 Sorghum bicolor
Sobic.004G258800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 60425532-60426531 Sorghum bicolor
Sobic.004G258800 2.0kb upstream 2.0kb upstream 2630 true Chr04: 60426532-60429161 Sorghum bicolor
Sobic.004G258800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 60427162-60429161 Sorghum bicolor
Sobic.004G258800 2.0kb downstream 2.0kb downstream 2630 true Chr04: 60424532-60427161 Sorghum bicolor
Sobic.004G258800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 60424532-60426531 Sorghum bicolor
Sobic.004G258800 5.0kb upstream 5.0kb upstream 5630 true Chr04: 60426532-60432161 Sorghum bicolor
Sobic.004G258800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 60427162-60432161 Sorghum bicolor
Sobic.004G258800 5.0kb downstream 5.0kb downstream 5630 true Chr04: 60421532-60427161 Sorghum bicolor
Sobic.004G258800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 60421532-60426531 Sorghum bicolor
Sobic.004G258800 10.0kb upstream 10.0kb upstream 10630 true Chr04: 60426532-60437161 Sorghum bicolor
Sobic.004G258800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 60427162-60437161 Sorghum bicolor
Sobic.004G258800 10.0kb downstream 10.0kb downstream 10630 true Chr04: 60416532-60427161 Sorghum bicolor
Sobic.004G258800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 60416532-60426531 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179376 5267 Panicoideae View MSA
124573146 5269 Grass View MSA
122046855 5273 Angiosperm View MSA
121348500 5274 Embryophyte View MSA
123380884 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.296       High
cufflinks 0.14       Low
cufflinks 0.391       Low
cufflinks 0.585        
cufflinks 2.187        
cufflinks 0.998        
cufflinks 0.729        
cufflinks 0.32       Low
cufflinks 1.57        
cufflinks 0.881        
cufflinks 0.301       Low
cufflinks 0.571        
cufflinks 1.196        
cufflinks 0.896        
cufflinks 2.49       High
cufflinks 0.873        
cufflinks 1.132        
cufflinks 0.961        
cufflinks 1.913        
cufflinks 1.009        
cufflinks 1.071        
cufflinks 0.669        
cufflinks 0.511        
cufflinks 0.867        
cufflinks 0.541        
cufflinks 0.312       Low
cufflinks 0.306       Low
cufflinks 8.608       High
cufflinks 0.632        
cufflinks 2.679       High

0 Strain