Gene : Sobic.004G252500 S. bicolor v3.1.1
Defline:  (1 of 1) K04773 - protease IV [EC:3.4.21.-] (sppA) Genomic Order:  2638
Name:  ? Sobic.004G252500 Secondary Identifier:  ? PAC:37931904
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G252500 0.5kb upstream 0.5kb upstream 12053 true Chr04: 59850264-59862316 Sorghum bicolor
Sobic.004G252500 0.5kb upstream 0.5kb upstream 500 false Chr04: 59850264-59850763 Sorghum bicolor
Sobic.004G252500 0.5kb downstream 0.5kb downstream 12053 true Chr04: 59850764-59862816 Sorghum bicolor
Sobic.004G252500 0.5kb downstream 0.5kb downstream 500 false Chr04: 59862317-59862816 Sorghum bicolor
Sobic.004G252500 1.0kb upstream 1.0kb upstream 12553 true Chr04: 59849764-59862316 Sorghum bicolor
Sobic.004G252500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 59849764-59850763 Sorghum bicolor
Sobic.004G252500 1.0kb downstream 1.0kb downstream 12553 true Chr04: 59850764-59863316 Sorghum bicolor
Sobic.004G252500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 59862317-59863316 Sorghum bicolor
Sobic.004G252500 2.0kb upstream 2.0kb upstream 13553 true Chr04: 59848764-59862316 Sorghum bicolor
Sobic.004G252500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 59848764-59850763 Sorghum bicolor
Sobic.004G252500 2.0kb downstream 2.0kb downstream 13553 true Chr04: 59850764-59864316 Sorghum bicolor
Sobic.004G252500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 59862317-59864316 Sorghum bicolor
Sobic.004G252500 5.0kb upstream 5.0kb upstream 16553 true Chr04: 59845764-59862316 Sorghum bicolor
Sobic.004G252500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 59845764-59850763 Sorghum bicolor
Sobic.004G252500 5.0kb downstream 5.0kb downstream 16553 true Chr04: 59850764-59867316 Sorghum bicolor
Sobic.004G252500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 59862317-59867316 Sorghum bicolor
Sobic.004G252500 10.0kb upstream 10.0kb upstream 21553 true Chr04: 59840764-59862316 Sorghum bicolor
Sobic.004G252500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 59840764-59850763 Sorghum bicolor
Sobic.004G252500 10.0kb downstream 10.0kb downstream 21553 true Chr04: 59850764-59872316 Sorghum bicolor
Sobic.004G252500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 59862317-59872316 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183074 5267 Panicoideae View MSA
124579610 5269 Grass View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.519       Low
cufflinks 4.786       High
cufflinks 9.878     High High
cufflinks 3.734        
cufflinks 2.38        
cufflinks 2.549        
cufflinks 6.365       High
cufflinks 3.38        
cufflinks 1.981        
cufflinks 2.044        
cufflinks 0.658       Low
cufflinks 0.854        
cufflinks 1.483        
cufflinks 0.585       Low
cufflinks 2.124        
cufflinks 7.587       High
cufflinks 6.592       High
cufflinks 7.807       High
cufflinks 3.554        
cufflinks 6.89       High
cufflinks 2.233        
cufflinks 0.782       Low
cufflinks 0.861        
cufflinks 0.849        
cufflinks 3.621        
cufflinks 4.329        
cufflinks 0.671       Low
cufflinks 0.257       Low
cufflinks 4.431        
cufflinks 2.087        

0 Strain