Gene : Sobic.004G252100 S. bicolor v3.1.1
Defline:  (1 of 2) K11129 - H/ACA ribonucleoprotein complex subunit 2 (NHP2, NOLA2) Genomic Order:  2633
Name:  ? Sobic.004G252100 Secondary Identifier:  ? PAC:37932231
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G252100 0.5kb upstream 0.5kb upstream 2818 true Chr04: 59813527-59816344 Sorghum bicolor
Sobic.004G252100 0.5kb upstream 0.5kb upstream 500 false Chr04: 59813527-59814026 Sorghum bicolor
Sobic.004G252100 0.5kb downstream 0.5kb downstream 2818 true Chr04: 59814027-59816844 Sorghum bicolor
Sobic.004G252100 0.5kb downstream 0.5kb downstream 500 false Chr04: 59816345-59816844 Sorghum bicolor
Sobic.004G252100 1.0kb upstream 1.0kb upstream 3318 true Chr04: 59813027-59816344 Sorghum bicolor
Sobic.004G252100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 59813027-59814026 Sorghum bicolor
Sobic.004G252100 1.0kb downstream 1.0kb downstream 3318 true Chr04: 59814027-59817344 Sorghum bicolor
Sobic.004G252100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 59816345-59817344 Sorghum bicolor
Sobic.004G252100 2.0kb upstream 2.0kb upstream 4318 true Chr04: 59812027-59816344 Sorghum bicolor
Sobic.004G252100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 59812027-59814026 Sorghum bicolor
Sobic.004G252100 2.0kb downstream 2.0kb downstream 4318 true Chr04: 59814027-59818344 Sorghum bicolor
Sobic.004G252100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 59816345-59818344 Sorghum bicolor
Sobic.004G252100 5.0kb upstream 5.0kb upstream 7318 true Chr04: 59809027-59816344 Sorghum bicolor
Sobic.004G252100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 59809027-59814026 Sorghum bicolor
Sobic.004G252100 5.0kb downstream 5.0kb downstream 7318 true Chr04: 59814027-59821344 Sorghum bicolor
Sobic.004G252100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 59816345-59821344 Sorghum bicolor
Sobic.004G252100 10.0kb upstream 10.0kb upstream 12318 true Chr04: 59804027-59816344 Sorghum bicolor
Sobic.004G252100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 59804027-59814026 Sorghum bicolor
Sobic.004G252100 10.0kb downstream 10.0kb downstream 12318 true Chr04: 59814027-59826344 Sorghum bicolor
Sobic.004G252100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 59816345-59826344 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
122176997 5267 Panicoideae View MSA
124585008 5269 Grass View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.572     High High
cufflinks 0.474       Low
cufflinks 4.96        
cufflinks 15.06     High  
cufflinks 14.918     High  
cufflinks 14.778     High  
cufflinks 9.351        
cufflinks 0.753       Low
cufflinks 20.195     High  
cufflinks 16.064     High  
cufflinks 16.798     High  
cufflinks 13.731     High  
cufflinks 8.427        
cufflinks 14.745     High  
cufflinks 10.019        
cufflinks 3.587        
cufflinks 12.682     High  
cufflinks 13.414     High  
cufflinks 2.454       Low
cufflinks 12.565     High  
cufflinks 43.546     High High
cufflinks 21.537     High  
cufflinks 19.82     High  
cufflinks 19.662     High  
cufflinks 0.945       Low
cufflinks 0.292       Low
cufflinks 12.543     High  
cufflinks 51.149     High High
cufflinks 3.737        
cufflinks 16.465     High  

0 Strain