Gene : 29908.t000215 R. communis v0.1
Defline:  (1 of 1) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  46
Name:  ? 29908.t000215 Secondary Identifier:  ? PAC:16812982
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29908.t000215 0.5kb upstream 0.5kb upstream 3190 true 29908: 302745-305934 Ricinus communis
29908.t000215 0.5kb upstream 0.5kb upstream 500 false 29908: 305435-305934 Ricinus communis
29908.t000215 0.5kb downstream 0.5kb downstream 3190 true 29908: 302245-305434 Ricinus communis
29908.t000215 0.5kb downstream 0.5kb downstream 500 false 29908: 302245-302744 Ricinus communis
29908.t000215 1.0kb upstream 1.0kb upstream 3690 true 29908: 302745-306434 Ricinus communis
29908.t000215 1.0kb upstream 1.0kb upstream 1000 false 29908: 305435-306434 Ricinus communis
29908.t000215 1.0kb downstream 1.0kb downstream 3690 true 29908: 301745-305434 Ricinus communis
29908.t000215 1.0kb downstream 1.0kb downstream 1000 false 29908: 301745-302744 Ricinus communis
29908.t000215 2.0kb upstream 2.0kb upstream 4690 true 29908: 302745-307434 Ricinus communis
29908.t000215 2.0kb upstream 2.0kb upstream 2000 false 29908: 305435-307434 Ricinus communis
29908.t000215 2.0kb downstream 2.0kb downstream 4690 true 29908: 300745-305434 Ricinus communis
29908.t000215 2.0kb downstream 2.0kb downstream 2000 false 29908: 300745-302744 Ricinus communis
29908.t000215 5.0kb upstream 5.0kb upstream 7690 true 29908: 302745-310434 Ricinus communis
29908.t000215 5.0kb upstream 5.0kb upstream 5000 false 29908: 305435-310434 Ricinus communis
29908.t000215 5.0kb downstream 5.0kb downstream 7690 true 29908: 297745-305434 Ricinus communis
29908.t000215 5.0kb downstream 5.0kb downstream 5000 false 29908: 297745-302744 Ricinus communis
29908.t000215 10.0kb upstream 10.0kb upstream 12690 true 29908: 302745-315434 Ricinus communis
29908.t000215 10.0kb upstream 10.0kb upstream 10000 false 29908: 305435-315434 Ricinus communis
29908.t000215 10.0kb downstream 10.0kb downstream 12690 true 29908: 292745-305434 Ricinus communis
29908.t000215 10.0kb downstream 10.0kb downstream 10000 false 29908: 292745-302744 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453510 5262 Malpighiales View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain