Gene : Sobic.004G243600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23073:SF29 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  2541
Name:  ? Sobic.004G243600 Secondary Identifier:  ? PAC:37929586
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G243600 0.5kb upstream 0.5kb upstream 6309 true Chr04: 59117288-59123596 Sorghum bicolor
Sobic.004G243600 0.5kb upstream 0.5kb upstream 500 false Chr04: 59117288-59117787 Sorghum bicolor
Sobic.004G243600 0.5kb downstream 0.5kb downstream 6309 true Chr04: 59117788-59124096 Sorghum bicolor
Sobic.004G243600 0.5kb downstream 0.5kb downstream 500 false Chr04: 59123597-59124096 Sorghum bicolor
Sobic.004G243600 1.0kb upstream 1.0kb upstream 6809 true Chr04: 59116788-59123596 Sorghum bicolor
Sobic.004G243600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 59116788-59117787 Sorghum bicolor
Sobic.004G243600 1.0kb downstream 1.0kb downstream 6809 true Chr04: 59117788-59124596 Sorghum bicolor
Sobic.004G243600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 59123597-59124596 Sorghum bicolor
Sobic.004G243600 2.0kb upstream 2.0kb upstream 7809 true Chr04: 59115788-59123596 Sorghum bicolor
Sobic.004G243600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 59115788-59117787 Sorghum bicolor
Sobic.004G243600 2.0kb downstream 2.0kb downstream 7809 true Chr04: 59117788-59125596 Sorghum bicolor
Sobic.004G243600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 59123597-59125596 Sorghum bicolor
Sobic.004G243600 5.0kb upstream 5.0kb upstream 10809 true Chr04: 59112788-59123596 Sorghum bicolor
Sobic.004G243600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 59112788-59117787 Sorghum bicolor
Sobic.004G243600 5.0kb downstream 5.0kb downstream 10809 true Chr04: 59117788-59128596 Sorghum bicolor
Sobic.004G243600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 59123597-59128596 Sorghum bicolor
Sobic.004G243600 10.0kb upstream 10.0kb upstream 15809 true Chr04: 59107788-59123596 Sorghum bicolor
Sobic.004G243600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 59107788-59117787 Sorghum bicolor
Sobic.004G243600 10.0kb downstream 10.0kb downstream 15809 true Chr04: 59117788-59133596 Sorghum bicolor
Sobic.004G243600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 59123597-59133596 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176789 5267 Panicoideae View MSA
124574663 5269 Grass View MSA
122047930 5273 Angiosperm View MSA
121346990 5274 Embryophyte View MSA
123425607 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.625       Low
cufflinks 4.379        
cufflinks 6.34       High
cufflinks 5.283        
cufflinks 6.59       High
cufflinks 8.585       High
cufflinks 3.621        
cufflinks 2.499       Low
cufflinks 5.733        
cufflinks 5.54        
cufflinks 2.813       Low
cufflinks 3.299        
cufflinks 6.445       High
cufflinks 3.024       Low
cufflinks 6.588       High
cufflinks 5.339        
cufflinks 3.287        
cufflinks 3.364        
cufflinks 4.604        
cufflinks 4.342        
cufflinks 10.405       High
cufflinks 4.54        
cufflinks 3.528        
cufflinks 3.607        
cufflinks 4.726        
cufflinks 4.681        
cufflinks 3.077       Low
cufflinks 6.142       High
cufflinks 2.535       Low
cufflinks 5.879        

0 Strain