Gene : Sobic.009G126400 S. bicolor v3.1.1
Defline:  (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) Genomic Order:  1302
Name:  ? Sobic.009G126400 Secondary Identifier:  ? PAC:37922617
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G126400 0.5kb upstream 0.5kb upstream 7533 true Chr09: 48024072-48031604 Sorghum bicolor
Sobic.009G126400 0.5kb upstream 0.5kb upstream 500 false Chr09: 48024072-48024571 Sorghum bicolor
Sobic.009G126400 0.5kb downstream 0.5kb downstream 7533 true Chr09: 48024572-48032104 Sorghum bicolor
Sobic.009G126400 0.5kb downstream 0.5kb downstream 500 false Chr09: 48031605-48032104 Sorghum bicolor
Sobic.009G126400 1.0kb upstream 1.0kb upstream 8033 true Chr09: 48023572-48031604 Sorghum bicolor
Sobic.009G126400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48023572-48024571 Sorghum bicolor
Sobic.009G126400 1.0kb downstream 1.0kb downstream 8033 true Chr09: 48024572-48032604 Sorghum bicolor
Sobic.009G126400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48031605-48032604 Sorghum bicolor
Sobic.009G126400 2.0kb upstream 2.0kb upstream 9033 true Chr09: 48022572-48031604 Sorghum bicolor
Sobic.009G126400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48022572-48024571 Sorghum bicolor
Sobic.009G126400 2.0kb downstream 2.0kb downstream 9033 true Chr09: 48024572-48033604 Sorghum bicolor
Sobic.009G126400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48031605-48033604 Sorghum bicolor
Sobic.009G126400 5.0kb upstream 5.0kb upstream 12033 true Chr09: 48019572-48031604 Sorghum bicolor
Sobic.009G126400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48019572-48024571 Sorghum bicolor
Sobic.009G126400 5.0kb downstream 5.0kb downstream 12033 true Chr09: 48024572-48036604 Sorghum bicolor
Sobic.009G126400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48031605-48036604 Sorghum bicolor
Sobic.009G126400 10.0kb upstream 10.0kb upstream 17033 true Chr09: 48014572-48031604 Sorghum bicolor
Sobic.009G126400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48014572-48024571 Sorghum bicolor
Sobic.009G126400 10.0kb downstream 10.0kb downstream 17033 true Chr09: 48024572-48041604 Sorghum bicolor
Sobic.009G126400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48031605-48041604 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178426 5267 Panicoideae View MSA
124574148 5269 Grass View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.791       High
cufflinks 2.579       Low
cufflinks 3.444        
cufflinks 5.211        
cufflinks 4.023        
cufflinks 4.701        
cufflinks 2.798        
cufflinks 2.217       Low
cufflinks 6.115       High
cufflinks 6.254       High
cufflinks 4.074        
cufflinks 4.078        
cufflinks 4.139        
cufflinks 3.609        
cufflinks 3.961        
cufflinks 3.97        
cufflinks 2.865        
cufflinks 3.154        
cufflinks 3.061        
cufflinks 4.119        
cufflinks 5.563       High
cufflinks 4.487        
cufflinks 4.055        
cufflinks 4.022        
cufflinks 3.682        
cufflinks 2.422       Low
cufflinks 4.299        
cufflinks 12.18     High High
cufflinks 2.742       Low
cufflinks 4.438        

0 Strain