Gene : Sobic.004G295100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF134 - AQUAPORIN TRANSPORTER // AQUAPORIN TIP2-3-RELATED Genomic Order:  3095
Name:  ? Sobic.004G295100 Secondary Identifier:  ? PAC:37933906
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G295100 0.5kb upstream 0.5kb upstream 2075 true Chr04: 63500544-63502618 Sorghum bicolor
Sobic.004G295100 0.5kb upstream 0.5kb upstream 500 false Chr04: 63500544-63501043 Sorghum bicolor
Sobic.004G295100 0.5kb downstream 0.5kb downstream 2075 true Chr04: 63501044-63503118 Sorghum bicolor
Sobic.004G295100 0.5kb downstream 0.5kb downstream 500 false Chr04: 63502619-63503118 Sorghum bicolor
Sobic.004G295100 1.0kb upstream 1.0kb upstream 2575 true Chr04: 63500044-63502618 Sorghum bicolor
Sobic.004G295100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 63500044-63501043 Sorghum bicolor
Sobic.004G295100 1.0kb downstream 1.0kb downstream 2575 true Chr04: 63501044-63503618 Sorghum bicolor
Sobic.004G295100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 63502619-63503618 Sorghum bicolor
Sobic.004G295100 2.0kb upstream 2.0kb upstream 3575 true Chr04: 63499044-63502618 Sorghum bicolor
Sobic.004G295100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 63499044-63501043 Sorghum bicolor
Sobic.004G295100 2.0kb downstream 2.0kb downstream 3575 true Chr04: 63501044-63504618 Sorghum bicolor
Sobic.004G295100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 63502619-63504618 Sorghum bicolor
Sobic.004G295100 5.0kb upstream 5.0kb upstream 6575 true Chr04: 63496044-63502618 Sorghum bicolor
Sobic.004G295100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 63496044-63501043 Sorghum bicolor
Sobic.004G295100 5.0kb downstream 5.0kb downstream 6575 true Chr04: 63501044-63507618 Sorghum bicolor
Sobic.004G295100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 63502619-63507618 Sorghum bicolor
Sobic.004G295100 10.0kb upstream 10.0kb upstream 11575 true Chr04: 63491044-63502618 Sorghum bicolor
Sobic.004G295100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 63491044-63501043 Sorghum bicolor
Sobic.004G295100 10.0kb downstream 10.0kb downstream 11575 true Chr04: 63501044-63512618 Sorghum bicolor
Sobic.004G295100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 63502619-63512618 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192931 5267 Panicoideae View MSA
124584121 5269 Grass View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.362       Low
cufflinks 2.781        
cufflinks 0.762       Low
cufflinks 1.4        
cufflinks 1.447        
cufflinks 3.238        
cufflinks 24.646     High  
cufflinks 34.322     High  
cufflinks 0.558       Low
cufflinks 0.961        
cufflinks 714.164     High High
cufflinks 473.462     High High
cufflinks 0.397       Low
cufflinks 794.346     High High
cufflinks 18.248     High  
cufflinks 1.736        
cufflinks 14.842     High  
cufflinks 14.506     High  
cufflinks 3.976        
cufflinks 14.782     High  
cufflinks 0.424       Low
cufflinks 1061.657     High High
cufflinks 680.454     High High
cufflinks 701.373     High High
cufflinks 5.22        
cufflinks 5.462        
cufflinks 124.871     High  
cufflinks 0.04     Low Low
cufflinks 34.066     High  
cufflinks 3.599        

0 Strain