Gene : Sobic.004G295400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23342//PTHR23342:SF5 - N-ACETYLGLUTAMATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  3098
Name:  ? Sobic.004G295400 Secondary Identifier:  ? PAC:37930794
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor ARGSYNBSUB-PWY Sorghum bicolor pathologic  
Sbicolor ARGSYN-PWY Sorghum bicolor pathologic  
Sbicolor GLUTORN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G295400 0.5kb upstream 0.5kb upstream 1999 true Chr04: 63517661-63519659 Sorghum bicolor
Sobic.004G295400 0.5kb upstream 0.5kb upstream 500 false Chr04: 63519160-63519659 Sorghum bicolor
Sobic.004G295400 0.5kb downstream 0.5kb downstream 1999 true Chr04: 63517161-63519159 Sorghum bicolor
Sobic.004G295400 0.5kb downstream 0.5kb downstream 500 false Chr04: 63517161-63517660 Sorghum bicolor
Sobic.004G295400 1.0kb upstream 1.0kb upstream 2499 true Chr04: 63517661-63520159 Sorghum bicolor
Sobic.004G295400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 63519160-63520159 Sorghum bicolor
Sobic.004G295400 1.0kb downstream 1.0kb downstream 2499 true Chr04: 63516661-63519159 Sorghum bicolor
Sobic.004G295400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 63516661-63517660 Sorghum bicolor
Sobic.004G295400 2.0kb upstream 2.0kb upstream 3499 true Chr04: 63517661-63521159 Sorghum bicolor
Sobic.004G295400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 63519160-63521159 Sorghum bicolor
Sobic.004G295400 2.0kb downstream 2.0kb downstream 3499 true Chr04: 63515661-63519159 Sorghum bicolor
Sobic.004G295400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 63515661-63517660 Sorghum bicolor
Sobic.004G295400 5.0kb upstream 5.0kb upstream 6499 true Chr04: 63517661-63524159 Sorghum bicolor
Sobic.004G295400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 63519160-63524159 Sorghum bicolor
Sobic.004G295400 5.0kb downstream 5.0kb downstream 6499 true Chr04: 63512661-63519159 Sorghum bicolor
Sobic.004G295400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 63512661-63517660 Sorghum bicolor
Sobic.004G295400 10.0kb upstream 10.0kb upstream 11499 true Chr04: 63517661-63529159 Sorghum bicolor
Sobic.004G295400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 63519160-63529159 Sorghum bicolor
Sobic.004G295400 10.0kb downstream 10.0kb downstream 11499 true Chr04: 63507661-63519159 Sorghum bicolor
Sobic.004G295400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 63507661-63517660 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177701 5267 Panicoideae View MSA
124576008 5269 Grass View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.759       High
cufflinks 0.233        
cufflinks 0.09        
cufflinks 0.041     Low Low
cufflinks 0.132        
cufflinks 0.083     Low  
cufflinks 0.257        
cufflinks 0.452        
cufflinks 0.045     Low Low
cufflinks 0.026     Low Low
cufflinks 0.595        
cufflinks 0.987       High
cufflinks 0.032     Low Low
cufflinks 0.81       High
cufflinks 0.042     Low Low
cufflinks 0.114        
cufflinks 0.171        
cufflinks 0.19        
cufflinks 0.065     Low  
cufflinks 0.259        
cufflinks 0.098     Low  
cufflinks 1.163       High
cufflinks 0.772       High
cufflinks 0.713       High
cufflinks 0.481        
cufflinks 0.296        
cufflinks 0.264        
cufflinks 0.171        
cufflinks 0.258        
cufflinks 0.107        

0 Strain