Gene : Sobic.009G195900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR16517//PTHR16517:SF32 - TUBBY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2022
Name:  ? Sobic.009G195900 Secondary Identifier:  ? PAC:37921397
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G195900 0.5kb upstream 0.5kb upstream 6309 true Chr09: 54671664-54677972 Sorghum bicolor
Sobic.009G195900 0.5kb upstream 0.5kb upstream 500 false Chr09: 54671664-54672163 Sorghum bicolor
Sobic.009G195900 0.5kb downstream 0.5kb downstream 6309 true Chr09: 54672164-54678472 Sorghum bicolor
Sobic.009G195900 0.5kb downstream 0.5kb downstream 500 false Chr09: 54677973-54678472 Sorghum bicolor
Sobic.009G195900 1.0kb upstream 1.0kb upstream 6809 true Chr09: 54671164-54677972 Sorghum bicolor
Sobic.009G195900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54671164-54672163 Sorghum bicolor
Sobic.009G195900 1.0kb downstream 1.0kb downstream 6809 true Chr09: 54672164-54678972 Sorghum bicolor
Sobic.009G195900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54677973-54678972 Sorghum bicolor
Sobic.009G195900 2.0kb upstream 2.0kb upstream 7809 true Chr09: 54670164-54677972 Sorghum bicolor
Sobic.009G195900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54670164-54672163 Sorghum bicolor
Sobic.009G195900 2.0kb downstream 2.0kb downstream 7809 true Chr09: 54672164-54679972 Sorghum bicolor
Sobic.009G195900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54677973-54679972 Sorghum bicolor
Sobic.009G195900 5.0kb upstream 5.0kb upstream 10809 true Chr09: 54667164-54677972 Sorghum bicolor
Sobic.009G195900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54667164-54672163 Sorghum bicolor
Sobic.009G195900 5.0kb downstream 5.0kb downstream 10809 true Chr09: 54672164-54682972 Sorghum bicolor
Sobic.009G195900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54677973-54682972 Sorghum bicolor
Sobic.009G195900 10.0kb upstream 10.0kb upstream 15809 true Chr09: 54662164-54677972 Sorghum bicolor
Sobic.009G195900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54662164-54672163 Sorghum bicolor
Sobic.009G195900 10.0kb downstream 10.0kb downstream 15809 true Chr09: 54672164-54687972 Sorghum bicolor
Sobic.009G195900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54677973-54687972 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181453 5267 Panicoideae View MSA
124569658 5269 Grass View MSA
122045291 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121310429 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.758       Low
cufflinks 15.069     High  
cufflinks 31.471     High High
cufflinks 29.428     High High
cufflinks 7.192       Low
cufflinks 35.744     High High
cufflinks 10.897        
cufflinks 12.129     High  
cufflinks 17.653     High  
cufflinks 14.297     High  
cufflinks 11.579        
cufflinks 12.626     High  
cufflinks 34.488     High High
cufflinks 11.275        
cufflinks 33.335     High High
cufflinks 16.58     High  
cufflinks 12.414     High  
cufflinks 12.181     High  
cufflinks 12.627     High  
cufflinks 13.519     High  
cufflinks 7.405       Low
cufflinks 9.301        
cufflinks 11.241        
cufflinks 10.28        
cufflinks 13.457     High  
cufflinks 9.91     High  
cufflinks 16.828     High  
cufflinks 32.159     High High
cufflinks 13.748     High  
cufflinks 26.388     High High

0 Strain