Gene : Sobic.004G296400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11785:SF407 - CATIONIC AMINO ACID TRANSPORTER 9, CHLOROPLASTIC Genomic Order:  3108
Name:  ? Sobic.004G296400 Secondary Identifier:  ? PAC:37932813
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G296400 0.5kb upstream 0.5kb upstream 4100 true Chr04: 63609266-63613365 Sorghum bicolor
Sobic.004G296400 0.5kb upstream 0.5kb upstream 500 false Chr04: 63612866-63613365 Sorghum bicolor
Sobic.004G296400 0.5kb downstream 0.5kb downstream 4100 true Chr04: 63608766-63612865 Sorghum bicolor
Sobic.004G296400 0.5kb downstream 0.5kb downstream 500 false Chr04: 63608766-63609265 Sorghum bicolor
Sobic.004G296400 1.0kb upstream 1.0kb upstream 4600 true Chr04: 63609266-63613865 Sorghum bicolor
Sobic.004G296400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 63612866-63613865 Sorghum bicolor
Sobic.004G296400 1.0kb downstream 1.0kb downstream 4600 true Chr04: 63608266-63612865 Sorghum bicolor
Sobic.004G296400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 63608266-63609265 Sorghum bicolor
Sobic.004G296400 2.0kb upstream 2.0kb upstream 5600 true Chr04: 63609266-63614865 Sorghum bicolor
Sobic.004G296400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 63612866-63614865 Sorghum bicolor
Sobic.004G296400 2.0kb downstream 2.0kb downstream 5600 true Chr04: 63607266-63612865 Sorghum bicolor
Sobic.004G296400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 63607266-63609265 Sorghum bicolor
Sobic.004G296400 5.0kb upstream 5.0kb upstream 8600 true Chr04: 63609266-63617865 Sorghum bicolor
Sobic.004G296400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 63612866-63617865 Sorghum bicolor
Sobic.004G296400 5.0kb downstream 5.0kb downstream 8600 true Chr04: 63604266-63612865 Sorghum bicolor
Sobic.004G296400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 63604266-63609265 Sorghum bicolor
Sobic.004G296400 10.0kb upstream 10.0kb upstream 13600 true Chr04: 63609266-63622865 Sorghum bicolor
Sobic.004G296400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 63612866-63622865 Sorghum bicolor
Sobic.004G296400 10.0kb downstream 10.0kb downstream 13600 true Chr04: 63599266-63612865 Sorghum bicolor
Sobic.004G296400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 63599266-63609265 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176971 5267 Panicoideae View MSA
124570306 5269 Grass View MSA
122045273 5273 Angiosperm View MSA
121343810 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.446     High Low
cufflinks 8.218     High Low
cufflinks 15.259     High  
cufflinks 21.939     High  
cufflinks 20.912     High  
cufflinks 11.107       Low
cufflinks 24.837     High  
cufflinks 11.872     High Low
cufflinks 21.542     High  
cufflinks 21.474     High  
cufflinks 23.133     High  
cufflinks 27.713     High High
cufflinks 17.092     High  
cufflinks 28.443     High High
cufflinks 19.22     High  
cufflinks 16.107     High  
cufflinks 23.509     High  
cufflinks 22.842     High  
cufflinks 11.485     High Low
cufflinks 28.752     High High
cufflinks 20.301     High  
cufflinks 23.983     High  
cufflinks 28.9     High High
cufflinks 29.873     High High
cufflinks 16.144     High  
cufflinks 8.493     High Low
cufflinks 19.857     High  
cufflinks 8.459       Low
cufflinks 17.508     High  
cufflinks 19.081     High  

0 Strain