Gene : Sobic.009G201200 S. bicolor v3.1.1
Defline:  (1 of 1) K14558 - periodic tryptophan protein 2 (PWP2, UTP1) Genomic Order:  2080
Name:  ? Sobic.009G201200 Secondary Identifier:  ? PAC:37920459
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G201200 0.5kb upstream 0.5kb upstream 5630 true Chr09: 55082352-55087981 Sorghum bicolor
Sobic.009G201200 0.5kb upstream 0.5kb upstream 500 false Chr09: 55087482-55087981 Sorghum bicolor
Sobic.009G201200 0.5kb downstream 0.5kb downstream 5630 true Chr09: 55081852-55087481 Sorghum bicolor
Sobic.009G201200 0.5kb downstream 0.5kb downstream 500 false Chr09: 55081852-55082351 Sorghum bicolor
Sobic.009G201200 1.0kb upstream 1.0kb upstream 6130 true Chr09: 55082352-55088481 Sorghum bicolor
Sobic.009G201200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 55087482-55088481 Sorghum bicolor
Sobic.009G201200 1.0kb downstream 1.0kb downstream 6130 true Chr09: 55081352-55087481 Sorghum bicolor
Sobic.009G201200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 55081352-55082351 Sorghum bicolor
Sobic.009G201200 2.0kb upstream 2.0kb upstream 7130 true Chr09: 55082352-55089481 Sorghum bicolor
Sobic.009G201200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 55087482-55089481 Sorghum bicolor
Sobic.009G201200 2.0kb downstream 2.0kb downstream 7130 true Chr09: 55080352-55087481 Sorghum bicolor
Sobic.009G201200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 55080352-55082351 Sorghum bicolor
Sobic.009G201200 5.0kb upstream 5.0kb upstream 10130 true Chr09: 55082352-55092481 Sorghum bicolor
Sobic.009G201200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 55087482-55092481 Sorghum bicolor
Sobic.009G201200 5.0kb downstream 5.0kb downstream 10130 true Chr09: 55077352-55087481 Sorghum bicolor
Sobic.009G201200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 55077352-55082351 Sorghum bicolor
Sobic.009G201200 10.0kb upstream 10.0kb upstream 15130 true Chr09: 55082352-55097481 Sorghum bicolor
Sobic.009G201200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 55087482-55097481 Sorghum bicolor
Sobic.009G201200 10.0kb downstream 10.0kb downstream 15130 true Chr09: 55072352-55087481 Sorghum bicolor
Sobic.009G201200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 55072352-55082351 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190015 5267 Panicoideae View MSA
124571485 5269 Grass View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.244     High High
cufflinks 0.518       Low
cufflinks 0.78       Low
cufflinks 3.041        
cufflinks 7.518        
cufflinks 2.691        
cufflinks 4.287        
cufflinks 0.749       Low
cufflinks 10.145        
cufflinks 9.744        
cufflinks 8.065        
cufflinks 9.343        
cufflinks 4.723        
cufflinks 9.022        
cufflinks 4.005        
cufflinks 0.95       Low
cufflinks 4.451        
cufflinks 4.658        
cufflinks 1.134       Low
cufflinks 4.943        
cufflinks 15.895     High High
cufflinks 9.815        
cufflinks 11.021        
cufflinks 11.533     High  
cufflinks 0.899       Low
cufflinks 0.481       Low
cufflinks 6.164        
cufflinks 9.023        
cufflinks 2.787        
cufflinks 8.097        

0 Strain