Gene : Sobic.009G201600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED Genomic Order:  2084
Name:  ? Sobic.009G201600 Secondary Identifier:  ? PAC:37920062
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G201600 0.5kb upstream 0.5kb upstream 5210 true Chr09: 55101061-55106270 Sorghum bicolor
Sobic.009G201600 0.5kb upstream 0.5kb upstream 500 false Chr09: 55101061-55101560 Sorghum bicolor
Sobic.009G201600 0.5kb downstream 0.5kb downstream 5210 true Chr09: 55101561-55106770 Sorghum bicolor
Sobic.009G201600 0.5kb downstream 0.5kb downstream 500 false Chr09: 55106271-55106770 Sorghum bicolor
Sobic.009G201600 1.0kb upstream 1.0kb upstream 5710 true Chr09: 55100561-55106270 Sorghum bicolor
Sobic.009G201600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 55100561-55101560 Sorghum bicolor
Sobic.009G201600 1.0kb downstream 1.0kb downstream 5710 true Chr09: 55101561-55107270 Sorghum bicolor
Sobic.009G201600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 55106271-55107270 Sorghum bicolor
Sobic.009G201600 2.0kb upstream 2.0kb upstream 6710 true Chr09: 55099561-55106270 Sorghum bicolor
Sobic.009G201600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 55099561-55101560 Sorghum bicolor
Sobic.009G201600 2.0kb downstream 2.0kb downstream 6710 true Chr09: 55101561-55108270 Sorghum bicolor
Sobic.009G201600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 55106271-55108270 Sorghum bicolor
Sobic.009G201600 5.0kb upstream 5.0kb upstream 9710 true Chr09: 55096561-55106270 Sorghum bicolor
Sobic.009G201600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 55096561-55101560 Sorghum bicolor
Sobic.009G201600 5.0kb downstream 5.0kb downstream 9710 true Chr09: 55101561-55111270 Sorghum bicolor
Sobic.009G201600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 55106271-55111270 Sorghum bicolor
Sobic.009G201600 10.0kb upstream 10.0kb upstream 14710 true Chr09: 55091561-55106270 Sorghum bicolor
Sobic.009G201600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 55091561-55101560 Sorghum bicolor
Sobic.009G201600 10.0kb downstream 10.0kb downstream 14710 true Chr09: 55101561-55116270 Sorghum bicolor
Sobic.009G201600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 55106271-55116270 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187881 5267 Panicoideae View MSA
124579095 5269 Grass View MSA
122042716 5273 Angiosperm View MSA
121345418 5274 Embryophyte View MSA
123424346 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.059        
cufflinks 1.069       Low
cufflinks 3.493        
cufflinks 4.249        
cufflinks 3.318        
cufflinks 7.124       High
cufflinks 5.161        
cufflinks 4.417        
cufflinks 6.206       High
cufflinks 5.44        
cufflinks 2.18        
cufflinks 1.7       Low
cufflinks 3.594        
cufflinks 1.832       Low
cufflinks 4.906        
cufflinks 2.189        
cufflinks 5.292        
cufflinks 6.658       High
cufflinks 2.321        
cufflinks 3.882        
cufflinks 2.379        
cufflinks 3.446        
cufflinks 2.648        
cufflinks 2.501        
cufflinks 0.892       Low
cufflinks 1.327       Low
cufflinks 2.153        
cufflinks 17.505     High High
cufflinks 10.896       High
cufflinks 4.56        

0 Strain